Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00107 ATGATTTTTTATGCAAATATATGGAAGTCATCTTCAAGTCTCCGATTCAAAGCTCATACAGCTTTCCTGGTGCTAACAATCACTTATGTCTATTCATTCTTCTTTGACAAAGTGGTGAATGGGAAACCAGATGCATATAGTCTCGTTTCATGTGCTTCCTTTGCTATCATGTCACTCAGTTTGTCACGGCGAACTCATTGCGGAGTTGAAATTGATCTTCTCTACTTCTTCCTCGGATGTCTAATTGTGCAGCTCATGAAGATTAGCTTGCAGTTACTCATTCTTGGAGCAGGTTTCAGCTACTCCCTTATTATTCTTCATTCTTCACTCTCTTCAACAGATGATGGAATAAAAAACGAGTATTTTGACCCGCAAGGTGAAAATTCACTTGTCCTTGAAATGGATTCCTTACTACTGGAACAGCTTAAAACTTGTATGAAGGGAATTGAAGAGGAGAATTTGAATCTCGTAGACAGGCTTATGGAGCTCGTGAAGGAATACAATCTAGATAAGAGTGAATTACATTTACTCGGTAAGTCTGATTATGTAATGGATTCTCTGTCATCAAGAAAGATCCATAATCTTAATGAAACAATGAAGTTGATGGTAGCAACTGGTTATAAGAAAGAGTGCTATGATGTGTATAGCAGTTGGCGCAAGGTATTCTTGAAGGCGAGACTTGGCATGGAGGCATTTTGGAATCCAATGCAACATGAAGTTGAGAGAAGAGATAATTTCAACAGGCTTAGGGAGATAGGGATTATAGTTATAGTTAGATTCTTGATCAACCTATGTAAGCTGACATCTTTTGTGATCTCTTTGTAG 825 0.3806 MIFYANIWKSSSSLRFKAHTAFLVLTITYVYSFFFDKVVNGKPDAYSLVSCASFAIMSLSLSRRTHCGVEIDLLYFFLGCLIVQLMKISLQLLILGAGFSYSLIILHSSLSSTDDGIKNEYFDPQGENSLVLEMDSLLLEQLKTCMKGIEEENLNLVDRLMELVKEYNLDKSELHLLGKSDYVMDSLSSRKIHNLNETMKLMVATGYKKECYDVYSSWRKVFLKARLGMEAFWNPMQHEVERRDNFNRLREIGIIVIVRFLINLCKLTSFVISL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00107 274 Gene3D Exocyst complex component Exo70 123 248 - -
Vifa6g00107 274 SUPERFAMILY Cullin repeat-like 142 228 IPR016159 -
Vifa6g00107 274 Coils Coil 146 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00107 Vifa-Chr6 34913422 34914246 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00107 181 242 EXO70 exocyst subunit family AT5G58430 33.784 1.31e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00107 - - mtr:11426486 288.885