Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00101 ATGCGTCTCCCATGCCCAGTTCCCCCAACCTTTTGTTTACAAAACCGTTCCAACCACACTTCTGCTCCATTAACCCCTCTTTCATTCTCTACCGCTCACAACTATAACCTCCCTCTCAACGTCCCCTTCGCCCCTTTCTCTCGCTCTGACAAGGTAGGCCGAATCGCCGATGGGACTCGCAACTTCAACAACAAGACCCGATCCAAAACCCCCACCGATTCTGCCTTCGATTTCACCCTCGACGATTCCGTCCCAGGCAACACCGATGACGACGCCGCATTCCGCTTAGTCGTTGGACTCAGCATCAAATCCAACAAGAGATTCGTTTGCGAGGCTGTGAAATCTTCAATGGCGGGTGAAGTTGAGGTATTCGAAAAAGAGACACTAGCTGTTTCTCTGGCTAAATACGTCGCTGATCTATCCAATAAGTTTACTCAACAAAGAGGGGCTTTCACTGTTTGCTTGTCTGGTGGTTCTTTGATCAATTATCTTCAGAAATTGTTGGAGGCTCCGTATGTTGATTCTATTGAATGGGGTAAATGGCATGTGTTTTGGGTGGATGAGAGAGTTGCACCTAAGGATCATGAAGATAGTAACTATAAGCTTGCTTTTGATGGCTTTCTCTCCAAGGTGCCCATTCCATCCGGCAATGTTTATGCAATCAATGATGCCCTTTCGGCTGAAGGAGCAACTGATGATTACGAGACATGTGTCAAACACTTGGTCAATAGCAATGTGATAACATCATCATCATGCAGCATCAATTTCCTCTTTTCCTTTTAG 783 0.4623 MRLPCPVPPTFCLQNRSNHTSAPLTPLSFSTAHNYNLPLNVPFAPFSRSDKVGRIADGTRNFNNKTRSKTPTDSAFDFTLDDSVPGNTDDDAAFRLVVGLSIKSNKRFVCEAVKSSMAGEVEVFEKETLAVSLAKYVADLSNKFTQQRGAFTVCLSGGSLINYLQKLLEAPYVDSIEWGKWHVFWVDERVAPKDHEDSNYKLAFDGFLSKVPIPSGNVYAINDALSAEGATDDYETCVKHLVNSNVITSSSCSINFLFSF 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00101 260 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 36 109 IPR007783 GO:0003743|GO:0005737|GO:0005852
Vifa6g00101 260 SUPERFAMILY NagB/RpiA/CoA transferase-like 126 241 IPR037171 -
Vifa6g00101 260 Gene3D - 110 250 - -
Vifa6g00101 260 Pfam Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 126 243 IPR006148 GO:0005975
Vifa6g00101 260 PANTHER 6-PHOSPHOGLUCONOLACTONASE 112 252 IPR039104 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00101 Vifa-Chr6 32569121 32569986 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00101 36 99 Eukaryotic Initiation Factors Gene Family AT4G20980 51.948 1.51e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00101 K01057 - gmx:100794078 233.417