Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00078 ATGGATACCACAAAGGATCATCAAAATGTTGTTACCTTAGACGTCCATGCTGCCAAAGATCTGCTACATTCATCTCGTTACAATTATCTTGATGTGAGGTCCGTAGAGGAATTCAATAAAAGCCATGTTGAGAATGCTATTAATATCCCCTATATGTTCATGACAGAAGAAGGACGGGTGATAAATCCTGATTTTGTTAGCCAAGTAGAAGCAATATGTAAGAGTGAGGATCACTTAATTGTGGCTTGCAATAGTGGTGGAAGATCAAGTCGAGCCTGTGTTGATCTCCATAAATCAGGATTTCAAAATATTGTTAACATGGGTGGAGGCTACTCAGCGTGGGTGGACGCTGGATTTGCAGGTGACATGCCTGCACAAGACCTTAAAACATCTTGCGAGTTCCGTCCATAA 411 0.4136 MDTTKDHQNVVTLDVHAAKDLLHSSRYNYLDVRSVEEFNKSHVENAINIPYMFMTEEGRVINPDFVSQVEAICKSEDHLIVACNSGGRSSRACVDLHKSGFQNIVNMGGGYSAWVDAGFAGDMPAQDLKTSCEFRP 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00078 136 ProSiteProfiles Rhodanese domain profile. 23 123 IPR001763 -
Vifa6g00078 136 PANTHER THIOSULFATE SULFURTRANSFERASE 18 4 123 IPR044684 GO:0003824
Vifa6g00078 136 SMART rhod_4 13 120 IPR001763 -
Vifa6g00078 136 Pfam Rhodanese-like domain 17 116 IPR001763 -
Vifa6g00078 136 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 9 119 IPR036873 -
Vifa6g00078 136 CDD RHOD 18 115 - -
Vifa6g00078 136 Gene3D - 2 120 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00078 Vifa-Chr6 20661137 20662020 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00078 1 119 Sulfurtransferasese or Rhodanese AT5G66170 42.975 7.61e-32 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00078 K22547 - gmx:100794624 231.876