Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00051 ATGATGCCAATAAATCTAAATATTGATTGGGATGATGGGTTCTTACATTACTTCGATGAAGACATTGGCACAAGTTGTGGTTGCGGTTACAGCAGCAACAGAGAAGAAGAAGATGATTATGTAGATTCAGAAGAGTTGTTTGAGATAAATCTGAAGGGAGAAGATTGTGAGAGTAGTGTTTTCTCTATTGATATCCACAACAATATAAAAAAAGATGATGTTGTTTATGTGGCTGTTGGAGAAACTGGTTCAAGCATGGGAGCACTTTCATGGACCTTAAAACACTTAGTGAACCCTAATTCTACTACTGTTTCTCTTTTACATATTTTCCCTCAAGCCAAGCGAATTCCAACTTCACTGGGAAAAATTCCAAGGAAATGTGTGAGTGAAGAACATGTTAACAACTACTTGAGCCAAGAGAAAATGAAGAGGAAAATACTCCTTCAAAAGTTCGTTGACATGTGTACTGGCTCAAAAGTTAAGGTGGAGATGTTGCTTGTTGAGAATGACAACGTTGGTAAAGCCATTGTAGATCTTGTGAAGAATCTAAGTATAAGAAAATTAGTGATAGGAACTACCCAATCTAATCTAAGAAAACATGTGTCAAGAAGGCAAAATTCTACTGCGGAGATGGTGTTAAAAAGTATAGAAGAAAGATGTGATGTTAAAATCATATGTGAAGGAAGAGAAGTGATTGATCAGATGATTAATGGATGTGCTTCTGAGCATGATGAAGTAGATGGTTTTGTTCCAATCAAACAACTGAAACCATTTTGGTTATTTATGTCTAGATATGATTGGAATTGGAACTACACAATCTAA 822 0.3564 MMPINLNIDWDDGFLHYFDEDIGTSCGCGYSSNREEEDDYVDSEELFEINLKGEDCESSVFSIDIHNNIKKDDVVYVAVGETGSSMGALSWTLKHLVNPNSTTVSLLHIFPQAKRIPTSLGKIPRKCVSEEHVNNYLSQEKMKRKILLQKFVDMCTGSKVKVEMLLVENDNVGKAIVDLVKNLSIRKLVIGTTQSNLRKHVSRRQNSTAEMVLKSIEERCDVKIICEGREVIDQMINGCASEHDEVDGFVPIKQLKPFWLFMSRYDWNWNYTI 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00051 273 Pfam Universal stress protein family 75 214 IPR006016 -
Vifa6g00051 273 Gene3D HUPs 63 225 IPR014729 -
Vifa6g00051 273 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 39 239 - -
Vifa6g00051 273 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 77 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00051 Vifa-Chr6 9812145 9813135 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00051 72 228 U-box Gene Family AT2G45910 27.778 5.66e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00051 - - tpra:123908796 301.212