Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00032 ATGGCAGTGAATCGTGATATTGACGGCGATGATGATTGCTTACACTACTCCGATGAAGACATCGGCATAAGATGTGGTTGTGGTTTGATTGGGTTCAAGAAAAACCAAGTCTTTGATTACAATTTCAATAGCGAGATAGAAGAAGATGATGATTTGTTTGAGATAAATCTTAAGAAGGAAGAACCATTGGATTCAATCAAAGAAGAAGATTGTGAAAGCAGTACTGTCTTCTCTCTTGATATCCACAACGATAAGTTTTCTGATTCTGATTCTGATGTGGTTTATGTGGCTGTTGGAGAAACTTTTTCAAGCATGGAAGCACTTTCGTGGACCTTAAAACACTTGGTGAACCCTAATTTTACTATTGTTTCTCTTATACATGTTTTCCCTCAAGTCAAGCGAATTCCAACTCCATTGGGAAAAATTCCAAGGAGTCGTGTGAATAAACAACATGTCAACATCTACTTGACCCAAGTGAAAAGCAAGAGGAAAATACTCCTTCAGAAGTTCATTGACCTATGTATTGACTCAAAAGTTAAGGTGGAGATTTTGCTTATTGAGGGTGACAACGTTGGTGAAGCCGTTGTAGAGACTGTTACGAATCTAAATATTACAAAATTGGTGATTGGAACTACACAATCTAATCTAAGAAAACATGTGTCAAGAAGACAAATTTCTACTGCAGAGATGGTGTTAAACAGTTTAGAAGAAAGATGTGATGTTAAAATCATATGTGAAGGAAGAGAAGTGATTCATGAGATGAATAATAGGTGCAGTTCACAGCATGATGAAGTAGATGGTTTTGTTCCAATCAAGCGTTTCATGCCCAATCCGTTTTGGTTATTTAGGTCTAGGTGA 858 0.3695 MAVNRDIDGDDDCLHYSDEDIGIRCGCGLIGFKKNQVFDYNFNSEIEEDDDLFEINLKKEEPLDSIKEEDCESSTVFSLDIHNDKFSDSDSDVVYVAVGETFSSMEALSWTLKHLVNPNFTIVSLIHVFPQVKRIPTPLGKIPRSRVNKQHVNIYLTQVKSKRKILLQKFIDLCIDSKVKVEILLIEGDNVGEAVVETVTNLNITKLVIGTTQSNLRKHVSRRQISTAEMVLNSLEERCDVKIICEGREVIHEMNNRCSSQHDEVDGFVPIKRFMPNPFWLFRSR 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00032 285 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 96 218 - -
Vifa6g00032 285 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 35 261 - -
Vifa6g00032 285 Gene3D HUPs 87 220 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00032 Vifa-Chr6 7335611 7336641 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00032 91 248 U-box Gene Family AT4G25160 28.302 1.31e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00032 - - tpra:123908796 350.517