Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00031 ATGAACTCAGTGGCAAGCGCAAGTGAAGTTGTTGGTAAAGAACAACAGCAAGAACAGAATCTGACTCTTTATGGATATTGGAGAAGTTCATGTTCCTTCCGGGTCCGTATTGCTCTCAACCTCAAAGGTCTCAAATATGATTACAAATCAATTAATCTCTTGAAAGGAGAACAGTCTCATCCTGAGTTTCTCCAGCTTAACCCTGTGGGTTTTGTTCCCGTTCTCGTCGATGGCGATTCTGTCATTTTCGACTCTTTCGCCATTATTATGTATTTGGAGGACAAGTATCCTCAACATCCTTTCCTCCCTACTGATATTCGCAAACGAGCAATCAATTTCCAGGCTGTTAGTATTGTTTCTTCATCAATTCAACCTCTTCATAACTTAAACCTTCTGAAGTACATCGAGATTAATGTTGGCCCCGATGAAAAACTTCCATGGGTCCAGAGCGTAATTAGAAAAGGCTTCACAGCACTTGAAAAGCTATTGAAAGAATTCACTGGGAGGTATGCTACTGGAGACCAAGTTTCTATGGCGGATATATTTTTAGCACCTCAGATACATGCTGCAACTAATAAATTCAACATTGACATGAATGAGTTCCCTATTCTCTCAAGATTACATGAGACATATTATGATATCCCAGCATTCAGGGAGGCTTTGCCAGAGAATCAGCCAGATGCTGTAGGCTAG 693 0.4084 MNSVASASEVVGKEQQQEQNLTLYGYWRSSCSFRVRIALNLKGLKYDYKSINLLKGEQSHPEFLQLNPVGFVPVLVDGDSVIFDSFAIIMYLEDKYPQHPFLPTDIRKRAINFQAVSIVSSSIQPLHNLNLLKYIEINVGPDEKLPWVQSVIRKGFTALEKLLKEFTGRYATGDQVSMADIFLAPQIHAATNKFNIDMNEFPILSRLHETYYDIPAFREALPENQPDAVG 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00031 230 CDD GST_C_Zeta 108 225 IPR034330 -
Vifa6g00031 230 Pfam Glutathione S-transferase, N-terminal domain 20 93 IPR004045 -
Vifa6g00031 230 Gene3D - 104 229 - -
Vifa6g00031 230 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 19 100 IPR004045 -
Vifa6g00031 230 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 105 230 IPR010987 -
Vifa6g00031 230 PANTHER MALEYLACETOACETATE ISOMERASE 21 228 - -
Vifa6g00031 230 CDD GST_N_Zeta 21 93 IPR034333 -
Vifa6g00031 230 NCBIfam maleylacetoacetate isomerase 22 228 IPR005955 GO:0003824|GO:0005737|GO:0009072
Vifa6g00031 230 SFLD Main (cytGST) 21 208 - -
Vifa6g00031 230 FunFam Maleylacetoacetate isomerase 104 230 - -
Vifa6g00031 230 FunFam Glutathione S-transferase Z1 19 103 - -
Vifa6g00031 230 Pfam Glutathione S-transferase, C-terminal domain 148 190 - -
Vifa6g00031 230 SUPERFAMILY GST C-terminal domain-like 100 227 IPR036282 -
Vifa6g00031 230 SUPERFAMILY Thioredoxin-like 19 103 IPR036249 -
Vifa6g00031 230 Gene3D Glutaredoxin 18 103 - -
Vifa6g00031 230 SFLD Glutathione Transferase (cytosolic) 21 208 IPR040079 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00031 18 228 Glutathione S-transferase Gene Family AT2G02380 59.716 3.13e-94 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00031 K01800 - gmx:547590 343.969