Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g04052 ATGGCCTCAACCAAAACTTTTGCTTTTGAGGAAGTTTCCAAACACAACAACAAAAAAGATTGCTGGATTATGATCCATGGAAAGGTGTATGATGTGACATCATTTTTGGATGATCATCCAGGTGGTGATGAATCTTTAATTTCAGCAACAGGAAAGGATGCTAGTGTTGATTTTGAAGATGTAGGCCATAGTGACTCTGCAATAGATATGATGCACAAATACTTTATTGGGATGGTCGACACGTCGAACAAATCTCCGACTGAAGTTGACTCAAATCCGCCTCCGCGCCCGCCTACGCAAGCACGCAGCAATAGCGATCAGTCCTCCGGTTTTGCTTCAAAGGCATTGCAATTTCTGTTGCCGTTACTGATATTGGCATTTGCATTTGCCATGCAGTATTATGGAAAAAAGAAACAAGTCAGTGATGCCTAA 432 0.419 MASTKTFAFEEVSKHNNKKDCWIMIHGKVYDVTSFLDDHPGGDESLISATGKDASVDFEDVGHSDSAIDMMHKYFIGMVDTSNKSPTEVDSNPPPRPPTQARSNSDQSSGFASKALQFLLPLLILAFAFAMQYYGKKKQVSDA 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g04052 143 FunFam Cytochrome b5 type B 1 84 - -
Vifa5g04052 143 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 3 88 IPR036400 -
Vifa5g04052 143 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 35 42 IPR018506 GO:0020037
Vifa5g04052 143 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 4 80 IPR001199 -
Vifa5g04052 143 PANTHER CYTOCHROME B5 3 136 - -
Vifa5g04052 143 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 79 IPR001199 -
Vifa5g04052 143 Gene3D - 1 86 IPR036400 -
Vifa5g04052 143 MobiDBLite consensus disorder prediction 82 108 - -
Vifa5g04052 143 SMART Cyt_b5_2 7 80 IPR001199 -
Vifa5g04052 143 PRINTS Cytochrome B5 signature 67 79 IPR001199 -
Vifa5g04052 143 PRINTS Cytochrome B5 signature 54 61 IPR001199 -
Vifa5g04052 143 PRINTS Cytochrome B5 signature 39 53 IPR001199 -
Vifa5g04052 143 PRINTS Cytochrome B5 signature 29 39 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g04052 Vifa-Chr5 1285203652 1285204475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g04052 5 137 NADPH P450 reductases AT5G53560 57.353 4.24e-51 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g04052 K23490 - gmx:100500069 184.882