Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g04003 ATGACGACAATACGTAGGTTTTGCTGCAATGACCTTCTTCGTTTTACAAATGTCAATCTTGACCATCTCACTGAAACTTTTAATATGTCCTTCTACATGACCTATCTTGCGCGATGGCCCGATTATTTCCATGTCGCCGAAGCTCCCGGAAACCGAATTATGGGTTACATTATGGGTAAAGTAGAGGGGCAAGGAGACTCTTGGCATGGTCATGTAACTGCAGTAACAGTTGCTCCAGAGTATCGCAGGCAACAGTTAGCCAAGAAACTAATGAATCTTCTGGAAGACATCAGTGACAATATTGACAAAGCCTACTTTGTTGATCTGTTTGTGAGAGCATCAAATGCACCAGCCATCAAGATGTATGAAAAGCTTGGCTATGTGATATATCGACGAGTACTACGTTATTATTCCGGGGAAGAAGATGGATTGGATATGAGGAAAGCATTATCCCATGATGTTGAAAAGAAGTCCATCATCCCTCTTAAACGGCCTGTAACTCCTGATGAATTAGAGTATGACTAA 525 0.4171 MTTIRRFCCNDLLRFTNVNLDHLTETFNMSFYMTYLARWPDYFHVAEAPGNRIMGYIMGKVEGQGDSWHGHVTAVTVAPEYRRQQLAKKLMNLLEDISDNIDKAYFVDLFVRASNAPAIKMYEKLGYVIYRRVLRYYSGEEDGLDMRKALSHDVEKKSIIPLKRPVTPDELEYD 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g04003 174 FunFam N-alpha-acetyltransferase 20 2 161 - -
Vifa5g04003 174 Gene3D - 2 162 - -
Vifa5g04003 174 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 150 IPR016181 -
Vifa5g04003 174 CDD NAT_SF 45 97 - -
Vifa5g04003 174 Pfam Acetyltransferase (GNAT) family 38 127 IPR000182 GO:0016747
Vifa5g04003 174 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 151 IPR000182 GO:0016747
Vifa5g04003 174 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 1 171 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vifa5g04003 Acetyltransf_1 3.4e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g04003 K17972 - twl:120004610 348.977