Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa5g03979 | ATGGCTCGCCACCTTGCTATCCCATTTATCATTATTGCTATTCTTATAAACCCTTCCCTGCTCGTATCTCCTGCACCACCTAACCACACACAAGGTACATGTGTATTGGATTTCAATGCATCCCAATTCGAGTATATGCCATTTGGTGAATGTGGAAGTGTGAAAGAAGACATAACCAACTGGGGTAGCACTAGTGATGGTTTCCCAAGCACTATATGCTGCAGAAACTCTCTTACCCTGCTCTCAGATGCCCTGGCCTCGCAAGTCCGCAACTCAACGGGACAAGTCTTCCTTTCTCAACAACAATGGCAAAGTTGCAACAAATCATTCCATCCACAACAAGGAATGTCACTATCTTCATGTGGCTTTGATAACATTTACTTTGGTAGCTCCAAATGCTCCAACTTAAATTTGCTAGAAGCTCAGAACTTGCAACAGTTCACAGATGCATTGGAAACATGCAGCCACTTTGACCATTCGTTCGAAGAATCGTGTTTGGGTTGCACAAGTGCCATTTTGAGCTTACGAGATGCTTTGTATGATACAGTGGTTGGCAAAGAAAACTACAATGATACCGAGAGAGCCATATGCGGTGTAGCAGCTCTTGTTTCTGTCGCTTTTGAACAACAAGATGATCCTTTCCTTGCAGACAAATTCTTGCGATGCTTTCCGCCTCCACCAGTATATCACAAAAAATCATCGATGAAGAAACTTGTGTTGGGAGTACTGGTGGTTGTTATCCTAGCATTATTGATTATTGTTTTTCTGGTAAAATGTGTATCGAAGAAAAAGCCTATTAAGAAGCATGCTCAGTTGAAACAGATAGCTACTTGGTCTGGACTTTACTGGTTCACGAAAACCGAAATTGAAAATGCGATGAACTTTGAAAATGAAAAGATAAACCTTGGACGCGGGAGTGCGGGCGAGGTGTATAGAGGCATTTTGCCTAGCGGACAAGTTGTGGCCATCAAGCATTTGATAAAGAGTAACACTTCCAGTTCTGATTCGTTCACGCGAGAACTTGCGGGTCTTTCTAGGCTTCGCCACCCGAACCTGGTTTGCTTGTTTGGTTGTTGCATGGAAGATGGTGAGAGATATTTAGTCTACGAGTTTTGCGCGAATGGAAATCTTGCTCAACATCTCTTGAGAAGAGATAGTCATTTGACTTGGGAAGCAAGAGTGAGGATTCTGAGAGAATGTTCATTTGCACTTAAGTATCTCCATCATCATATAGAGGGTTGTGTTGTACATAGAGATATCAAGCTTACAAACATTCTTTTGACTGAGAAATACGAAGCCAAACTCTCGGATTTCGGACTGTCAAGGATGATGGGAATGGAGGAGAGCAAGGTTTTTACTGATGTTAGAGGAACCATAGGTTATATGGATCCGGAGTACATGAGTAACGCCAAGCTAACTTGCGCGAGTGATGTATACAGTTTCGGAATTGTTGCTTTGCAAATTCTGTCAGGACAGAAAGTCATAGAATTGGATCTTGATGCTAGAGATCAACTCACCAGAAAGGCAAGAGATGTGAGTATCGGAAAGCGTCCACTGTCGGATTTTGTAGACTCGCGACTAAAGGGACAAGTTGATAAGACGGATTTCGGAGCTATTTTACAGATTGCAGTACTTTGTGTTGCAAAATCAAGCACGGGCCGTCCATCAATCGAGATTGTTTTTGACGAATTGGATAAAGTCTATAGGGACATAGAAGCACGCAAGAAGGCAACACCAACACCATCGACAACAACATCAACATCAACATCTAGCTCTAATTGA | 1782 | 0.4248 | MARHLAIPFIIIAILINPSLLVSPAPPNHTQGTCVLDFNASQFEYMPFGECGSVKEDITNWGSTSDGFPSTICCRNSLTLLSDALASQVRNSTGQVFLSQQQWQSCNKSFHPQQGMSLSSCGFDNIYFGSSKCSNLNLLEAQNLQQFTDALETCSHFDHSFEESCLGCTSAILSLRDALYDTVVGKENYNDTERAICGVAALVSVAFEQQDDPFLADKFLRCFPPPPVYHKKSSMKKLVLGVLVVVILALLIIVFLVKCVSKKKPIKKHAQLKQIATWSGLYWFTKTEIENAMNFENEKINLGRGSAGEVYRGILPSGQVVAIKHLIKSNTSSSDSFTRELAGLSRLRHPNLVCLFGCCMEDGERYLVYEFCANGNLAQHLLRRDSHLTWEARVRILRECSFALKYLHHHIEGCVVHRDIKLTNILLTEKYEAKLSDFGLSRMMGMEESKVFTDVRGTIGYMDPEYMSNAKLTCASDVYSFGIVALQILSGQKVIELDLDARDQLTRKARDVSIGKRPLSDFVDSRLKGQVDKTDFGAILQIAVLCVAKSSTGRPSIEIVFDELDKVYRDIEARKKATPTPSTTTSTSTSSSN | 593 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa5g03979 | 593 | SUPERFAMILY | Protein kinase-like (PK-like) | 279 | 568 | IPR011009 | - | |
Vifa5g03979 | 593 | SMART | serkin_6 | 295 | 545 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa5g03979 | 593 | MobiDBLite | consensus disorder prediction | 572 | 593 | - | - | |
Vifa5g03979 | 593 | Pfam | Protein kinase domain | 300 | 502 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa5g03979 | 593 | Gene3D | Phosphorylase Kinase; domain 1 | 266 | 371 | - | - | |
Vifa5g03979 | 593 | ProSiteProfiles | Protein kinase domain profile. | 296 | 568 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa5g03979 | 593 | FunFam | probable receptor-like protein kinase At5g59700 | 372 | 582 | - | - | |
Vifa5g03979 | 593 | Gene3D | Transferase(Phosphotransferase) domain 1 | 372 | 587 | - | - | |
Vifa5g03979 | 593 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 63 | 580 | - | - | |
Vifa5g03979 | 593 | Pfam | SPARK | 30 | 184 | IPR043891 | - | |
Vifa5g03979 | 593 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 415 | 427 | IPR008271 | GO:0004672|GO:0006468 | |
Vifa5g03979 | 593 | MobiDBLite | consensus disorder prediction | 577 | 593 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa5g03979 | Vifa-Chr5 | 1268475304 | 1268478228 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa5g03979 | 284 | 578 | Receptor kinase-like Gene Family | AT1G16260 | 36.700 | 1.39e-56 | 201 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_URK-2 | Vifa5g03979 | Pkinase | 1.5e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa5g03979 | - | - | gmx:100807158 | 763.451 |