Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03935 ATGGATTGGGTTTTTGTGCATAAAACTTGGGATAAGTGGGCTTCTAACAACATTGGTTCTGGTCTTCCTTTAAAAGCTGCTTTGCTCATTAATTATGACCCCACTGGACCATCTCGCCTCTTATCTACCATTGCTGAACAAGAAGGAATAAAACTAGATATCATTGAGTTGAGACATTTTGTAGATATCATCAAACAGAATAAGCTCCAGACTGAGATCTTCAACATTGGGCCCAATCAATATTTGGTCACGTCAATTCATGAGAACTGGTTTAGTGCAAGGTGCATAAACACCTCAAAACCTGCTGGGGAAGGTGCAATTGTTATGCAAACAGCAGCATATATTTTGGTTGCTCTATATGAAGGTTCCATTGCTCCTGCATCTCGTGCTATGGGAGCTGCTGATCACTTTACTGCGCAATTACTGCGAAAGAATCTTTAG 441 0.4059 MDWVFVHKTWDKWASNNIGSGLPLKAALLINYDPTGPSRLLSTIAEQEGIKLDIIELRHFVDIIKQNKLQTEIFNIGPNQYLVTSIHENWFSARCINTSKPAGEGAIVMQTAAYILVALYEGSIAPASRAMGAADHFTAQLLRKNL 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03935 146 Gene3D Dynein light chain 2a, cytoplasmic 9 145 - -
Vifa5g03935 146 PANTHER OS05G0241400 PROTEIN 1 146 - -
Vifa5g03935 146 Pfam Profilin 9 141 IPR005455 GO:0003779
Vifa5g03935 146 SUPERFAMILY Profilin (actin-binding protein) 10 129 IPR036140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03935 Vifa-Chr5 1256001590 1256002649 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03935 1 146 Carbohydrate Esterase AT4G19410 65.541 1.53e-65 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03935 - K19882 gmx:100811973 248.44