Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03877 ATGGCAGTGGATTTGTTGTCAAGAATCACTCTGAGGCCATTCAAGTTAAGCGACGTGGACGATTTCATGTTAGTAACATGTGATGATAGAGTAACAAACTTTACTAGAAGGAAATCTTTTGTTTCAAGGGAACAAGCTTTGAATCACATCCAAGATGTATGCATTCCTCACCCTTGGACACGTTCCATATGCATTGACGATAAAACTATTGGATTCATATCCATTTCTCCAGCTGGATCTGGTGATCATGATGATGATGACAGGTGTAGGGCTGAGATAGGCTATGCTGTAGCTGCTAACTACTGGGGTCAAGGGATTTGCACCAAAGCTCTTAAGGTTGCTGTATCACAAGTTTTCAAGGATGTTCCTTATTTGGTAAGGTTACAAGCTTTTGTTGATATGGAGAATCTAGCTTCACATAGGGTTTTGGAAAAGGTAGGGTTCTTTAGGGAGGGTGTACTTAGAAAGTATTCCTATGTCAAAGGGAGAGTTAAAGATATAGCTATTTTTAGCTTTTTGTTGGAGGATACTCATTCTCCGTTGGAACCATAG 552 0.4004 MAVDLLSRITLRPFKLSDVDDFMLVTCDDRVTNFTRRKSFVSREQALNHIQDVCIPHPWTRSICIDDKTIGFISISPAGSGDHDDDDRCRAEIGYAVAANYWGQGICTKALKVAVSQVFKDVPYLVRLQAFVDMENLASHRVLEKVGFFREGVLRKYSYVKGRVKDIAIFSFLLEDTHSPLEP 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03877 183 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 8 176 - -
Vifa5g03877 183 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 166 IPR000182 GO:0016747
Vifa5g03877 183 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 173 IPR016181 -
Vifa5g03877 183 Pfam Acetyltransferase (GNAT) domain 8 148 IPR000182 GO:0016747
Vifa5g03877 183 CDD NAT_SF 63 120 - -
Vifa5g03877 183 Gene3D - 6 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03877 Vifa-Chr5 1239810526 1239811077 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vifa5g03877 Acetyltransf_3 6.1e-21 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03877 - - qsu:112030472 238.039