Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03875 ATGGCCAAGGTGGATCTGTCTAGGATATCTCTGAGGCCATTCAAGCTAACAGACGTTGACGATTTCTTCTTATGGGCAGGTGACGACGAAGTAACCAAAAACATACGATGGAAGACATGTTTATCAAGGGAAGAAGCTCTAGCCTTCATCAAAGATGTCTGCATACCTCACCCATGGCGCCGTTCTATCTGTCTCGACGATCATTCTATCGGTTTTGTATCTGTATATCGTTGGTCGGGCGATGATAGATGCAAAGCTGACATAGGTTATGCTATTGCTGCAAACTATTGGGGACATGGAATAGCCACAAAAGCAGTCAAAATTGCAGTGTCTCATGTATTTAACGATTTTTCTGATTTGTTAAGGTTGCAGGCTTTTGCTGATGTTGATAATAAGGCTTCACATAGAGTTTTGGAAAAGGTTGGGTTTGTTAGAGAAGGTGTTGTAAGAAAATATACTTTTATCAAAGGTAGTGTTAAGGATTTAGCAGTGTTTAGTTTCTTGTCAACAGATGAAATTCCTCACGTTGACTAG 534 0.4045 MAKVDLSRISLRPFKLTDVDDFFLWAGDDEVTKNIRWKTCLSREEALAFIKDVCIPHPWRRSICLDDHSIGFVSVYRWSGDDRCKADIGYAIAANYWGHGIATKAVKIAVSHVFNDFSDLLRLQAFADVDNKASHRVLEKVGFVREGVVRKYTFIKGSVKDLAVFSFLSTDEIPHVD 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03875 177 Pfam Acetyltransferase (GNAT) domain 8 143 IPR000182 GO:0016747
Vifa5g03875 177 Gene3D - 3 173 - -
Vifa5g03875 177 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 172 - -
Vifa5g03875 177 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 168 IPR016181 -
Vifa5g03875 177 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 171 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03875 Vifa-Chr5 1239095369 1239095902 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vifa5g03875 Acetyltransf_3 3e-25 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03875 - - gmx:100527210 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03875 5 1239095369 1239095902 Vifa5g03875 5 1239095369 1239095902 ECH