Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03806 ATGTATGAGATGCTTGTTGGATATCCTCCATTCTGTTCTGATGATCCAAGGATGACCTACCGGAAGATTGTGAATTGGAAAGCATGCCTGAAATTCCCCGAAGAACCCAAGATATCAGCTGAAGCTAGGGATCTCATATGTAGCTTATTATGTGATGTTGACACAAGACTAGGAACAAGGGGAGTAGACGAAATAAAGGTAAAAACTCCCATGGGATATTATCTTCTAAAGTACGTGCTTTGGTTTCCACAAGCAGCTGAAGCTATAAGCCAAGATCTGCATGCAAAGATGGTGAATGAAACAGAAAAAGATGGTTTTGGAAGTGTAGAAGTAGCGGTCATCAGCATGCTTTTACATACAGGTACTAAAAATAAATAA 378 0.3968 MYEMLVGYPPFCSDDPRMTYRKIVNWKACLKFPEEPKISAEARDLICSLLCDVDTRLGTRGVDEIKVKTPMGYYLLKYVLWFPQAAEAISQDLHAKMVNETEKDGFGSVEVAVISMLLHTGTKNK 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03806 125 PANTHER MYOTONIC DYSTROPHY S/T KINASE-RELATED 1 59 - -
Vifa5g03806 125 Gene3D Transferase(Phosphotransferase) domain 1 1 68 - -
Vifa5g03806 125 SUPERFAMILY Protein kinase-like (PK-like) 1 66 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03806 Vifa-Chr5 1222321579 1222323396 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03806 1 66 AGC Kinase Gene Family AT5G09890 84.848 7.33e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03806 K08790 - twl:120009217 132.494