Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03801 ATGGAAGATAAACTAATTGAGATGCTTACTGAAAAGTTCAATCGCTTTGTTATTAACTGCAATTTGGATTCCTCAACAGAACAATTGAATGAAACCTCTATGGATGAGAATGCTATGTCATCGGATAATTCGACAGAACAATTGAGTGTAGTCCATGAAACTTCTCCTTACGACGATGGTCATACTCTACCAATATTGAAGAAAATTCTTGACCTAAGTACCAAAGCTCAGGATTTGAAGAGAGAACATGTTTCCCTTCGTAATCAAGTGAAACTCACATTTGAGTCATTTGCTGATCTAGGTGTTTTGAAGTCTATTCAGCTTCTGGGTGCTGAATATGAACTTTTGAAAAGAAAGTACATAGACGAGTCATTTGAGCGCAGGCGGCTTAACAATGAAGTGATTGAACTCAAGGGAAATATCAGAGTTTTCTGTAGGTGTCGACCATTAAATGAAAAAGAAATTGCTAATGGATCAGCATCTGTTGTCAATTTTGAGTCAACTGCTGAAGAAGAGCTTCAAGTTATATGTTCCGATTCTTCTAAAAAACAATTTAAATTCGACTATGTATTCAAACCCGAAGACAGTCAAGATGCTGTTTTTGCACAAACAAAGCCTATTGTTGGATCAGTATTAGATGGGTTCAATGTCTGCATTTTTGCATATGGCCAAACTGGTACCGGTAAGACCTTTACAATGGAGGGAACACCAGATAATCGGGGAGTTAACTATAGAACCCTTGAGGAATTGTTTCGGATTTCTGAAGAGAGACAGGGCACGATAAAATATGAATTGCTGGTTAGTATGTTGGAAGTGTATAATGAAAAGATTAGAGATCTCTTGGCAGGAAATTCTTCTGAAACAACTAAGAAGTTGGAGGTAAAGCAAGCCGCAGATGGAAGCCAAGAAGTACCAGGACTTGTTGAAACTCGTGTTTATGGAGCAGATGGTGTTTGGGAAATTTTGAAGTCTGGAAACAGAGTCAGATCAGTTGGTTCAACAAGTGCTAATGAGCTTAGCAGTCGTTCTCATTGTTTGGTGCGGGTAACCGTTATGGGGGAGAATTTAATCAATGGTCAGAGAACAAAAAGTCACCTTTGGTTAGTAGACTTGGCTGGCAGTGAGCGCGTAGGGAAGACTGAAGCTGAAGGAGAAAGGCTGAAGGAATCTCAGTTCATAAATAAATCTTTATCAGCACTCGGCGATGTTATTGCAGCCCTTGCCACCAAATCAGGCCACATTCCTTACAGGAACTCAAAGCTCACTCATATACTTCAGAGCTCGTTGGGAGGTGATTGCAAAACTCTTATGTTTGTCCAAATAAGTCCTAGTTCAGTAGACTTAACAGAGACGCTTTGTTCACTGAATTTTGCTACACGTGTTCGAGGAATTGAGAGTGGCCCAGCTCGCAAGCAAGTAGACCTCACTGAAATCTTGAAGTACAAGCAAATGGCTGAAAAGTCCAAACACGATGAGAAGGAGGTTAGAAAATTACAAGATAACTTGGAAACCGCTCAAATGAAACTAGCCACAAGAGAAATCATGTGCAAACATTTTCAAGACAAGGTTCGGAGTCTAGAGAACCAGATTGCAGAGGAGAGAAATATCAGATTAAAGCAAGAAGGTCGATCAATTACTGCTGAGAAAACAATAAAAAGGACATCACTTATTCCCTTGGAAAGACCCCCACTGAGAGCAATTAATAATTCCTTGCCTCCACGACCAACATCTGAGAGAAGGACCTTCTCATGCAGCTCTTCCTTGCAAGGAAAGGAAAATAATGACAGAATGACTTCAATGGCTCCAAGAAGAAGGGTATCTATTGCTGCAAAACCACCAGCTCACCAGCTTCTGCCTAGGAGGCGAGTTTCCCTGGCAACATTGCATCCTGAAACAAATTCACTCCATGCCTCTACTTCTCAATTCACCCGTGGAAGCAACACTCCACCGGCTCACCTGCTTCAGCCTAGGAGGCGAGTTTCCCTGGCAACAATGCATCCCGAAACAAATTCACTCCATGCCTCTACTTCTCAATTCACCAATGGAAGCAACAATCACCAACCAATGATAAGGAACCAAAGGAAAGCTCGGTATTCAAGCTTGTTCTCCCCAATATCAACATCAACAACTGAGACAACACCAAGTTTGAATAAGAGCAGCAGTAGTAGGTTTGCTGGCAGTCCAACACAAGCAGCAGATTCGCGGATGAGGGCTAGGCATCCAACTGTGATTGCATTGCAACGCAAATCTGTAGTGTGGAGTCCTCTCAAGCGTAGAGGCGTGGAAAGCAGCAGAAAATAA 2301 0.4176 MEDKLIEMLTEKFNRFVINCNLDSSTEQLNETSMDENAMSSDNSTEQLSVVHETSPYDDGHTLPILKKILDLSTKAQDLKREHVSLRNQVKLTFESFADLGVLKSIQLLGAEYELLKRKYIDESFERRRLNNEVIELKGNIRVFCRCRPLNEKEIANGSASVVNFESTAEEELQVICSDSSKKQFKFDYVFKPEDSQDAVFAQTKPIVGSVLDGFNVCIFAYGQTGTGKTFTMEGTPDNRGVNYRTLEELFRISEERQGTIKYELLVSMLEVYNEKIRDLLAGNSSETTKKLEVKQAADGSQEVPGLVETRVYGADGVWEILKSGNRVRSVGSTSANELSSRSHCLVRVTVMGENLINGQRTKSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVIAALATKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSVDLTETLCSLNFATRVRGIESGPARKQVDLTEILKYKQMAEKSKHDEKEVRKLQDNLETAQMKLATREIMCKHFQDKVRSLENQIAEERNIRLKQEGRSITAEKTIKRTSLIPLERPPLRAINNSLPPRPTSERRTFSCSSSLQGKENNDRMTSMAPRRRVSIAAKPPAHQLLPRRRVSLATLHPETNSLHASTSQFTRGSNTPPAHLLQPRRRVSLATMHPETNSLHASTSQFTNGSNNHQPMIRNQRKARYSSLFSPISTSTTETTPSLNKSSSSRFAGSPTQAADSRMRARHPTVIALQRKSVVWSPLKRRGVESSRK 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03801 766 Coils Coil 69 89 - -
Vifa5g03801 766 Gene3D Kinesin motor domain 135 507 IPR036961 -
Vifa5g03801 766 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 499 IPR027417 -
Vifa5g03801 766 PRINTS Kinesin heavy chain signature 334 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g03801 766 PRINTS Kinesin heavy chain signature 414 435 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g03801 766 PRINTS Kinesin heavy chain signature 214 235 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g03801 766 PRINTS Kinesin heavy chain signature 365 383 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g03801 766 ProSitePatterns Kinesin motor domain signature. 364 375 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vifa5g03801 766 ProSiteProfiles Kinesin motor domain profile. 140 464 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g03801 766 MobiDBLite consensus disorder prediction 704 729 - -
Vifa5g03801 766 FunFam Kinesin-like protein 135 504 - -
Vifa5g03801 766 PANTHER KINESIN-LIKE PROTEIN KLP-3 38 639 IPR027640 GO:0003777|GO:0007018
Vifa5g03801 766 Coils Coil 481 508 - -
Vifa5g03801 766 MobiDBLite consensus disorder prediction 564 599 - -
Vifa5g03801 766 MobiDBLite consensus disorder prediction 704 738 - -
Vifa5g03801 766 Coils Coil 516 543 - -
Vifa5g03801 766 MobiDBLite consensus disorder prediction 570 596 - -
Vifa5g03801 766 Pfam Kinesin motor domain 146 464 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g03801 766 SMART kinesin_4 138 472 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03801 Vifa-Chr5 1221957233 1221961625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03801 106 485 Calmodulin-binding Proteins AT5G65930 41.316 3.65e-78 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03801 K10406 - gmx:100788477 930.628