Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03758 ATGGACGGTAATGAGGGTTTTCCCGCTTATTGCCCCTCATGTGAGCAAGTTAAGGACGTACTCGTCCTACTTGCTGGGCTTGCAAGTTCTGTCTCTATCATCTTCCTGCTAGTCGTCACTTTTTCTCCCTCTAATCTCAAGTTCCACATAACTGATGCTTCTCTTACAATGTTCAACCTCACTGGCAACAACACTTTGGATTACAAGTTAGAAGCCAACATCACATCAAGAAATCCCAACAAGAACGTTGAAATATACTACAGGAAGCTCGCCGCAGTTGCATGGTACAAAGACAATGAGTTTGCTAGAGTGAATCTGCCACCTTTTGATCAAGGCCACAAGAATACCACTTTTCTGCATGTAGCGTTTGAAGGGAAGGGTTTGATCAAACTCAAACCTAAACAACTTTTCGAGTATAACGAAGAGTCCCGTGTAGGGATCTTTAATGACTTGGCTGTTGATTTGGATCTTTTAGTCAGGTATAAGTTTCAAAGTCACAGGACTACGGCCTACTATCCACCAATCGTGAAATGTCGTCGATTGAGTCTTTTATTGAATTCTAATGGTAACTCATCATCACCACCTTCTTTTCATGTTACAAGATGCAGATCTGGATTTTTCTTTGCTAATCGTGCATAA 639 0.4147 MDGNEGFPAYCPSCEQVKDVLVLLAGLASSVSIIFLLVVTFSPSNLKFHITDASLTMFNLTGNNTLDYKLEANITSRNPNKNVEIYYRKLAAVAWYKDNEFARVNLPPFDQGHKNTTFLHVAFEGKGLIKLKPKQLFEYNEESRVGIFNDLAVDLDLLVRYKFQSHRTTAYYPPIVKCRRLSLLLNSNGNSSSPPSFHVTRCRSGFFFANRA 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03758 212 PANTHER OS05G0367900 PROTEIN 20 183 IPR044839 GO:0098542
Vifa5g03758 212 Pfam Late embryogenesis abundant protein 73 128 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03758 Vifa-Chr5 1206906273 1206906911 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03758 45 191 SNARE and Associated Proteins AT1G32270 30.201 2.79e-19 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03758 - - psat:127128902 261.536