Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03726 ATGTCAACCGAACATGTTTTACCCTTCTCTGTTGTTTCTGTCGTTGAGGATGTTCTTCAACAACAACAACAACCACGTCCCCGCTCTAGCGATTTCAAATTTGCCTCCAGAAAAGCCGAAGAAGCTTCTTTGAGAAGGTATGAAGCGGCTGGTTGGTTGAGAAAAACGGTTGGAGTTGTTGGGGGGAAAGACTTACCAGCGGAACCTTCTGAAGAAGATTTTCGGATTGGTTTGCGAAGTGGGATTATCCTCTGCAATGCTCTCAACAAAATTCAACCTGGAGCTGTGGCCAAGGTGGTCGAAGGCCCTAGTGATTCTGTTATTATTCCTGATGGAGCCGCATTATCTGCTTTTCAATACTTTGAAAATGTAAGGAACTTTCTTGTGGCGGTCGAAGAAATCGGGCTTCCTACCTTTGAAGCTTCTGATTTGGAACAGGGAGGGAAATCTTCAAGAATAGTGAATTGTGTTTTGGCACTCAAGTCTCATGCTGAAGGGAAACTTGGAGGAAGAACTGGTTCAGGGTCATTGAAATTTGGTCAAAAGCCACCTACATCGGCGAAACCAATGATGAGGAAAAACTCAGAACCATTCATGAAGTCTCTATGGAGCATGGCAGTAGTTGACAGAGACGGTTACACGAGTGATAACTCTTTGTATAGTGATCTCGGACAGGATCGACCTGAAGGGGGTTCATTTTCTTCCTTAAACTCACTCGTTCGCCAATATTTGTCTGATAAGAAGCCGGAGGAGATTCCCATTGTAGTGGAGTCTCTTCTTAATAGAGTCATGGAAGAATTTGAGCGTCGAATGCAAGTTCAACAAGAAACGCAAATTCAGCAAGAACCGCAAGTTCAACAAGAAACGTTGAGAGCAACAACTCAAGAAGATAAGGCACCTTCTGAAACGGAACAATCAATTTCAAAAGATGTTTCTGTTGATGAAGAGATGGAGGAGGAAAAAGAGGATGGAGAACCGTTGCAAGACAAACAAGAGGAATGCTATGATGAGAACAGTAACAATGGCGATGCTGAAGAATCAAACAGCTTCAATTTAACGCAGCAAAGTTTAGTCGAGCAACAAAGTAGAATTGTCCAGCAGAGTTTAGTCGAGCAACAAAATAGAAGTGTTCAGGAAGTGAAAAACATTGTCTTTCAAACAAAATCCGGAATGAAGTTTCTGCAAAAAGAATACCAGAAGGATATGATCAATCTTAGTAAGCACCTGCGAGGTCTAGCTGCTGCTGCTTCAGGATATCATAAAGTTCTTGAAGAAAACCGCAAGTTATACAATCTAGTGCAGGATCTGAAAGGAAATATTAGGGTTTACTGTCGAGTTCGACCGTTCTTGGGAGGGCAAGCGAGTCAAAATAGTGTTGTCTGCAGCATTGAGGAAGGAAGTATGTCACTCATGATACCTCCCAATTCCAAACTTGGTAAAGAGGGAAAAAAGACATTTAACTTCAATAAAGTGTTTGGTTCTTCTTCAACACAAGGGGAAGTTTTCGCGGATACACAGCCTCTGATTCGTTCTGTTCTCGATGGTTACAATGTTTGTATATTTGCATATGGCCAAACAGGATCAGGAAAAACATACACTATGGCAGGACCTGACAATCTTGACGAGGACACCATAGGTGTGAACTACCGTGCATTGAGAGATCTTTTCTTTCTGTCAGACCAGAGAAAAGACACCATTATCTATGAAATATCGGTTCAGATGCTTGAGATTTACAATGAGCAAGTCAGAGACCTACTAGCTCCAGAGGGTTCCAACAAAAGATTAGAAATCCGCAATAGTTCCAGTAATGGCATCAACGTGCCAGAAGCGAACCTCGTTCCAGTTTCAACCACTTCCGAAGTCATAAATTTGATGAACTTGGGACATAAAAATCGCGCAGTTGGTTCTACTGCCATGAACGATCGTAGCAGTCGTTCTCACAGCTGCTTGACAGTTCACGTTCATGGAAAGAACTTGGTATCGGGAAGCATTATTCGAGGTTGTATGCATCTTGTCGACCTTGCGGGAAGTGAAAGGGCTGATAAAACCGAGGCCACGGGAGATAGGCTTAAAGAGGCTCAACATATCAACAAGTCACTTTCCGCCTTAGGAGATGTAATTGCTTCACTTGCTCAGAAGAATGCGCATGTTCCATACAGGAACAGCAAACTCACTCAGCTACTTCAGGATGCACTCGGAGGGCAGGCAAAAACCCTGATGTTTGTTCATATGAGTCCGGAACCTGATGCTCTTGGAGAAACACTTAGTACACTCAAGTTTGCCGAACGTGTCTCCTCCGTTGAACTCGGAGCTGCGCGTGTGAATAAAGATAACACAGAAGTGAAAGATCTTAAAGAACAGATTGCTATGCTGAAGGCAGCCTTAGCAAGGAAAGACGGAGAAGCCGAACACGTTCAGCAACCTACCAATAGTGGCCATGTAACACCAAAGCTGAAATCGTATGCGTCGTCACCTCCCATGCAGCGTAATGTGACATCTTCTGGAGGCCGTAAGGTGCCAAAAGACGACTCAAGTAGCATAATGGGCCAAAAAAAGAGTGCAACAAAGCTGAAAAGAAGAAGTCTAGATCCTCACGACGTATATCGGAATTCACTACCGTGGCCGCATGTTAACAATCAAGTCGTAAATGGAAAAGAGGACGACAAAGAATCCGTTTCAGGCGAATGGGTTGATAAGATTCGGATGAAGAGGACCGACAGCTTAACTAGTGATGATAGCTTAGTGGAACAATGGGAAGCAGATAGTAAACAATTCTCTCCAATAAGTCCAAGTTCATTTTCAGAAAATTCAAAGTTATGTTTGGAACCCGCTTTCGACATTGCCACAATGACAACAGAAGAATCTGATGAACTAGAAATCGCAACCAGTGATTCTTCAGAATCAGACATGAATTGGCTAACACAAGCACCTAAACCAACCGCGATTTCAAATGGATTACCCTCTATTAAAGCAAAGAAATCTATTAATCCAAAACCATCAAAGATCCCCGAAGTCAGGAGTATGATTCCATCGTTAATTCCGACTCCGTCCAAGAAACAACCAAGTCCAGTTATTCAAGCAAGAAAGAATCAAGGATCCATTGATGCAAAGAGGAGGAATGGGAATGCAAAGTGA 3135 0.4297 MSTEHVLPFSVVSVVEDVLQQQQQPRPRSSDFKFASRKAEEASLRRYEAAGWLRKTVGVVGGKDLPAEPSEEDFRIGLRSGIILCNALNKIQPGAVAKVVEGPSDSVIIPDGAALSAFQYFENVRNFLVAVEEIGLPTFEASDLEQGGKSSRIVNCVLALKSHAEGKLGGRTGSGSLKFGQKPPTSAKPMMRKNSEPFMKSLWSMAVVDRDGYTSDNSLYSDLGQDRPEGGSFSSLNSLVRQYLSDKKPEEIPIVVESLLNRVMEEFERRMQVQQETQIQQEPQVQQETLRATTQEDKAPSETEQSISKDVSVDEEMEEEKEDGEPLQDKQEECYDENSNNGDAEESNSFNLTQQSLVEQQSRIVQQSLVEQQNRSVQEVKNIVFQTKSGMKFLQKEYQKDMINLSKHLRGLAAAASGYHKVLEENRKLYNLVQDLKGNIRVYCRVRPFLGGQASQNSVVCSIEEGSMSLMIPPNSKLGKEGKKTFNFNKVFGSSSTQGEVFADTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMAGPDNLDEDTIGVNYRALRDLFFLSDQRKDTIIYEISVQMLEIYNEQVRDLLAPEGSNKRLEIRNSSSNGINVPEANLVPVSTTSEVINLMNLGHKNRAVGSTAMNDRSSRSHSCLTVHVHGKNLVSGSIIRGCMHLVDLAGSERADKTEATGDRLKEAQHINKSLSALGDVIASLAQKNAHVPYRNSKLTQLLQDALGGQAKTLMFVHMSPEPDALGETLSTLKFAERVSSVELGAARVNKDNTEVKDLKEQIAMLKAALARKDGEAEHVQQPTNSGHVTPKLKSYASSPPMQRNVTSSGGRKVPKDDSSSIMGQKKSATKLKRRSLDPHDVYRNSLPWPHVNNQVVNGKEDDKESVSGEWVDKIRMKRTDSLTSDDSLVEQWEADSKQFSPISPSSFSENSKLCLEPAFDIATMTTEESDELEIATSDSSESDMNWLTQAPKPTAISNGLPSIKAKKSINPKPSKIPEVRSMIPSLIPTPSKKQPSPVIQARKNQGSIDAKRRNGNAK 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03726 1044 FunFam Kinesin-like protein KIN-14I isoform A 434 809 - -
Vifa5g03726 1044 ProSiteProfiles Kinesin motor domain profile. 439 767 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g03726 1044 SUPERFAMILY Calponin-homology domain, CH-domain 46 168 IPR036872 -
Vifa5g03726 1044 MobiDBLite consensus disorder prediction 799 893 - -
Vifa5g03726 1044 CDD KISc_C_terminal 437 769 - -
Vifa5g03726 1044 PANTHER KINESIN-LIKE PROTEIN KLP-3 50 955 IPR027640 GO:0003777|GO:0007018
Vifa5g03726 1044 MobiDBLite consensus disorder prediction 274 347 - -
Vifa5g03726 1044 MobiDBLite consensus disorder prediction 1013 1029 - -
Vifa5g03726 1044 Pfam Calponin homology (CH) domain 46 165 IPR001715 GO:0005515
Vifa5g03726 1044 CDD CH_AtKIN14-like 45 162 - -
Vifa5g03726 1044 SMART kinesin_4 437 775 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g03726 1044 PRINTS Kinesin heavy chain signature 717 738 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g03726 1044 PRINTS Kinesin heavy chain signature 515 536 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g03726 1044 PRINTS Kinesin heavy chain signature 637 654 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g03726 1044 PRINTS Kinesin heavy chain signature 668 686 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g03726 1044 Gene3D Kinesin motor domain 434 808 IPR036961 -
Vifa5g03726 1044 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 439 802 IPR027417 -
Vifa5g03726 1044 SMART ch_5 45 163 IPR001715 GO:0005515
Vifa5g03726 1044 MobiDBLite consensus disorder prediction 805 852 - -
Vifa5g03726 1044 Coils Coil 774 801 - -
Vifa5g03726 1044 MobiDBLite consensus disorder prediction 274 294 - -
Vifa5g03726 1044 Gene3D - 35 167 IPR036872 -
Vifa5g03726 1044 ProSiteProfiles Calponin homology (CH) domain profile. 43 165 IPR001715 GO:0005515
Vifa5g03726 1044 MobiDBLite consensus disorder prediction 171 192 - -
Vifa5g03726 1044 MobiDBLite consensus disorder prediction 977 1044 - -
Vifa5g03726 1044 Pfam Kinesin motor domain 445 767 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g03726 1044 MobiDBLite consensus disorder prediction 295 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03726 Vifa-Chr5 1198782774 1198787861 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03726 427 767 Calmodulin-binding Proteins AT5G65930 40.988 9.58e-76 271