Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vifa5g03725 | ATGTCAACCGAACATGTTTTACCCTTCTCTGTTGTTTCTGTCGTTGAGGATGTTCTTCAACAACAACAACAACCACGTCCCCGCTCTAGCGATTTCAAATTTGCCTCCAGAAAAGCCGAAGAAGCTTCTTTGAGAAGGTATGAAGCGGCTGGTTGGTTGAGAAAAACGGTTGGAGTTGTTGGGGGGAAAGACTTACCAGCGGAACCTTCTGAAGAAGATTTTCGGATTGGTTTGCGAAGTGGGATTATCCTCTGCAATGCTCTCAACAAAATTCAACCTGGAGCTGTGGCCAAGGTGGTCGAAGGCCCTAGTGATTCTGTTATTATTCCTGATGGAGCCGCATTATCTGCTTTTCAATACTTTGAAAATGTAAGGAACTTTCTTGTGGCGGTCGAAGAAATCGGGCTTCCTACCTTTGAAGCTTCTGATTTGGAACAGGGAGGGAAATCTTCAAGAATAGTGAATTGTGTTTTGGCACTCAAGTCTCATGCTGAAGGGAAACTTGGAGGAAGAACTGGTTCAGGGTCATTGAAATTTGGTCAAAAGCCACCTACATCGGCGAAACCAATGATGAGGAAAAACTCAGAACCATTCATGAAGTCTCTATGGAGCATGGCAGTAGTTGACAGAGACGGTTACACGAGTGATAACTCTTTGTATAGTGATCTCGGACAGGATCGACCTGAAGGGGGTTCATTTTCTTCCTTAAACTCACTCGTTCGCCAATATTTGTCTGATAAGAAGCCGGAGGAGATTCCCATTGTAGTGGAGTCTCTTCTTAATAGAGTCATGGAAGAATTTGAGCGTCGAATGCAAGTTCAACAAGAAACGCAAATTCAGCAAGAACCGCAAGTTCAACAAGAAACGTTGAGAGCAACAACTCAAGAAGATAAGGCACCTTCTGAAACGGAACAATCAATTTCAAAAGATGTTTCTGTTGATGAAGAGATGGAGGAGGAAAAAGAGGATGGAGAACCGTTGCAAGACAAACAAGAGGAATGCTATGATGAGAACAGTAACAATGGCGATGCTGAAGAATCAAACAGCTTCAATTTAACGCAGCAAAGTTTAGTCGAGCAACAAAGTAGAATTGTCCAGCAGAGTTTAGTCGAGCAACAAAATAGAAGTGTTCAGGAAGTGAAAAACATTGTCTTTCAAACAAAATCCGGAATGAAGTTTCTGCAAAAAGAATACCAGAAGGATATGATCAATCTTAGTAAGCACCTGCGAGGTCTAGCTGCTGCTGCTTCAGGATATCATAAAGTTCTTGAAGAAAACCGCAAGTTATACAATCTAGTGCAGGATCTGAAAGGAAATATTAGGGTTTACTGTCGAGTTCGACCGTTCTTGGGAGGGCAAGCGAGTCAAAATAGTGTTGTCTGCAGCATTGAGGAAGGAAGTATGTCACTCATGATACCTCCCAATTCCAAACTTGGTAAAGAGGGAAAAAAGACATTTAACTTCAATAAAGTGTTTGGTTCTTCTTCAACACAAGGGGAAGTTTTCGCGGATACACAGCCTCTGATTCGTTCTGTTCTCGATGGTTACAATGTTTGTATATTTGCATATGGCCAAACAGGATCAGGAAAAACATACACTATGGCAGGACCTGACAATCTTGACGAGGACACCATAGGTGTGAACTACCGTGCATTGAGAGATCTTTTCTTTCTGTCAGACCAGAGAAAAGACACCATTATCTATGAAATATCGGTTCAGATGCTTGAGATTTACAATGAGCAAGTCAGAGACCTACTAGCTCCAGAGGACACATTAGAAATCCGCAATAGTTCCAGTAATGGCATCAACGTGCCAGAAGCGAACCTCGTTCCAGTTTCAACCACTTCCGAAGTCATAAATTTGATGAACTTGGGACATAAAAATCGCGCAGTTGGTTCTACTGCCATGAACGATCGTAGCAGTCGTTCTCACAGCTGCTTGACAGTTCACGTTCATGGAAAGAACTTGGTATCGGGAAGCATTATTCGAGGTTGTATGCATCTTGTCGACCTTGCGGGAAGTGAAAGGGCTGATAAAACCGAGGCCACGGGAGATAGGCTTAAAGAGGCTCAACATATCAACAAGTCACTTTCCGCCTTAGGAGATGTAATTGCTTCACTTGCTCAGAAGAATGCGCATGTTCCATACAGGAACAGCAAACTCACTCAGCTACTTCAGGATGCACTCGGAGGGCAGGCAAAAACCCTGATGTTTGTTCATATGAGTCCGGAACCTGATGCTCTTGGAGAAACACTTAGTACACTCAAGTTTGCCGAACGTGTCTCCTCCGTTGAACTCGGAGCTGCGCGTGTGAATAAAGATAACACAGAAGTGAAAGATCTTAAAGAACAGATTGCTATGCTGAAGGCAGCCTTAGCAAGGAAAGACGGAGAAGCCGAACACGTTCAGCAACCTACCAATAGTGGCCATGTAACACCAAAGCTGAAATCGTATGCGTCGTCACCTCCCATGCAGCGTAATGTGACATCTTCTGGAGGCCGTAAGGTGCCAAAAGACGACTCAAGTAGCATAATGGGCCAAAAAAAGAGTGCAACAAAGCTGAAAAGAAGAAGTCTAGATCCTCACGACGTATATCGGAATTCACTACCGTGGCCGCATGTTAACAATCAAGTCGTAAATGGAAAAGAGGACGACAAAGAATCCGTTTCAGGCGAATGGGTTGATAAGATTCGGATGAAGAGGACCGACAGCTTAACTAGTGATGATAGCTTAGTGGAACAATGGGAAGCAGATAGTAAACAATTCTCTCCAATAAGTCCAAGTTCATTTTCAGAAAATTCAAAGTTATGTTTGGAACCCGCTTTCGACATTGCCACAATGACAACAGAAGAATCTGATGAACTAGAAATCGCAACCAGTGATTCTTCAGAATCAGACATGAATTGGCTAACACAAGCACCTAAACCAACCGCGATTTCAAATGGATTACCCTCTATTAAAGCAAAGAAATCTATTAATCCAAAACCATCAAAGATCCCCGAAGTCAGGAGTATGATTCCATCGTTAATTCCGACTCCGTCCAAGAAACAACCAAGTCCAGTTATTCAAGCAAGAAAGAATCAAGGATCCATTGATGCAAAGAGGAGGAATGGGAATGCAAAGTGA | 3126 | 0.4299 | MSTEHVLPFSVVSVVEDVLQQQQQPRPRSSDFKFASRKAEEASLRRYEAAGWLRKTVGVVGGKDLPAEPSEEDFRIGLRSGIILCNALNKIQPGAVAKVVEGPSDSVIIPDGAALSAFQYFENVRNFLVAVEEIGLPTFEASDLEQGGKSSRIVNCVLALKSHAEGKLGGRTGSGSLKFGQKPPTSAKPMMRKNSEPFMKSLWSMAVVDRDGYTSDNSLYSDLGQDRPEGGSFSSLNSLVRQYLSDKKPEEIPIVVESLLNRVMEEFERRMQVQQETQIQQEPQVQQETLRATTQEDKAPSETEQSISKDVSVDEEMEEEKEDGEPLQDKQEECYDENSNNGDAEESNSFNLTQQSLVEQQSRIVQQSLVEQQNRSVQEVKNIVFQTKSGMKFLQKEYQKDMINLSKHLRGLAAAASGYHKVLEENRKLYNLVQDLKGNIRVYCRVRPFLGGQASQNSVVCSIEEGSMSLMIPPNSKLGKEGKKTFNFNKVFGSSSTQGEVFADTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMAGPDNLDEDTIGVNYRALRDLFFLSDQRKDTIIYEISVQMLEIYNEQVRDLLAPEDTLEIRNSSSNGINVPEANLVPVSTTSEVINLMNLGHKNRAVGSTAMNDRSSRSHSCLTVHVHGKNLVSGSIIRGCMHLVDLAGSERADKTEATGDRLKEAQHINKSLSALGDVIASLAQKNAHVPYRNSKLTQLLQDALGGQAKTLMFVHMSPEPDALGETLSTLKFAERVSSVELGAARVNKDNTEVKDLKEQIAMLKAALARKDGEAEHVQQPTNSGHVTPKLKSYASSPPMQRNVTSSGGRKVPKDDSSSIMGQKKSATKLKRRSLDPHDVYRNSLPWPHVNNQVVNGKEDDKESVSGEWVDKIRMKRTDSLTSDDSLVEQWEADSKQFSPISPSSFSENSKLCLEPAFDIATMTTEESDELEIATSDSSESDMNWLTQAPKPTAISNGLPSIKAKKSINPKPSKIPEVRSMIPSLIPTPSKKQPSPVIQARKNQGSIDAKRRNGNAK | 1041 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vifa5g03725 | 1041 | MobiDBLite | consensus disorder prediction | 1010 | 1026 | - | - | |
| Vifa5g03725 | 1041 | SUPERFAMILY | Calponin-homology domain, CH-domain | 46 | 168 | IPR036872 | - | |
| Vifa5g03725 | 1041 | FunFam | Kinesin-like protein KIN-14I isoform A | 434 | 806 | - | - | |
| Vifa5g03725 | 1041 | MobiDBLite | consensus disorder prediction | 274 | 347 | - | - | |
| Vifa5g03725 | 1041 | CDD | CH_AtKIN14-like | 45 | 162 | - | - | |
| Vifa5g03725 | 1041 | Pfam | Calponin homology (CH) domain | 46 | 165 | IPR001715 | GO:0005515 | |
| Vifa5g03725 | 1041 | Coils | Coil | 771 | 798 | - | - | |
| Vifa5g03725 | 1041 | Pfam | Kinesin motor domain | 445 | 764 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Vifa5g03725 | 1041 | MobiDBLite | consensus disorder prediction | 796 | 890 | - | - | |
| Vifa5g03725 | 1041 | ProSiteProfiles | Kinesin motor domain profile. | 439 | 764 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Vifa5g03725 | 1041 | SMART | ch_5 | 45 | 163 | IPR001715 | GO:0005515 | |
| Vifa5g03725 | 1041 | SMART | kinesin_4 | 437 | 772 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Vifa5g03725 | 1041 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 439 | 799 | IPR027417 | - | |
| Vifa5g03725 | 1041 | MobiDBLite | consensus disorder prediction | 274 | 294 | - | - | |
| Vifa5g03725 | 1041 | MobiDBLite | consensus disorder prediction | 974 | 1041 | - | - | |
| Vifa5g03725 | 1041 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 50 | 952 | IPR027640 | GO:0003777|GO:0007018 | |
| Vifa5g03725 | 1041 | Gene3D | - | 35 | 167 | IPR036872 | - | |
| Vifa5g03725 | 1041 | ProSiteProfiles | Calponin homology (CH) domain profile. | 43 | 165 | IPR001715 | GO:0005515 | |
| Vifa5g03725 | 1041 | MobiDBLite | consensus disorder prediction | 802 | 849 | - | - | |
| Vifa5g03725 | 1041 | PRINTS | Kinesin heavy chain signature | 634 | 651 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Vifa5g03725 | 1041 | PRINTS | Kinesin heavy chain signature | 515 | 536 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Vifa5g03725 | 1041 | PRINTS | Kinesin heavy chain signature | 714 | 735 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Vifa5g03725 | 1041 | PRINTS | Kinesin heavy chain signature | 665 | 683 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Vifa5g03725 | 1041 | CDD | KISc_C_terminal | 437 | 766 | - | - | |
| Vifa5g03725 | 1041 | MobiDBLite | consensus disorder prediction | 171 | 192 | - | - | |
| Vifa5g03725 | 1041 | Gene3D | Kinesin motor domain | 434 | 805 | IPR036961 | - | |
| Vifa5g03725 | 1041 | MobiDBLite | consensus disorder prediction | 295 | 314 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vifa5g03725 | Vifa-Chr5 | 1198782774 | 1198787861 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vifa5g03725 | 427 | 764 | Calmodulin-binding Proteins | AT5G65930 | 40.988 | 9.45e-75 | 268 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vifa5g03725 | K10406 | - | gmx:100799535 | 1362.44 |