Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03703 ATGGTTTCCGATAATCAATTTCGTAGGATTCTTAGTTTTGGGTCGAATCAGAATCTTGGTGTTACAAAACAAGCATCAAATAGTGGCCTTAAAAAAATGATTAACGCTCTAAAGATGAATGATCACGACTCGCTCCTCATAGAATCTTACATTCGAGAAGTGGTAAAAGATGAGGTCGTAAGAAAACTCCAAGAGCACTTATTTTCAAGAGACAAGAATAATGATGCTGGCAAATCTGGATCTAGATTCTTAGAGTTGTGTTTTATGAATAACAATAAGTTGCCAATTATGACTTATACTAAAACTAATATAATTCCAAAGGATGAACTATTTCAAGTTGCATTATTTGATGTTAGATCTAAGTCAATAGTCAACGATGGTCCTTTCTCTTCAATAAAGATAGAGATTTGTCCCATCAAGGATAACTCTGGATGGGTAAAAAACAAAAAGTTCAGTTTAGGAGCAAAAGCTATGGAAAACGGAGAGATCATTAAGGAAGGTAGAAGTAAAGCTTTTAGGGTCAAAGATGTCAGAGGAGAAGCTTACAAGAAACATTATCCTCCATACTTGAAGGATGATGTGTGGCGTTTGAAGAAAATTTCTGAAAATGGACCATTCCGTGACCGACTCCGTAGCAACGGAATTCATACTGTTAAGGATCTGTTGAGGTTACTCATAACCAATGAATCTTCATTACGTGAGAAATTTGGAAAAATTCAGAAGAAATGCTGGTATGATATTATCGAACATGCCCGGTCATGTATTGTAGATGATTACATGCTTTATAGCTATGAGATGATTGGAGAACCAATACTGCTTCTATTCAATGTGATCTATGAAGTTGTTGGTGTGACATTTGATACACAAAAGTTTTATTTACCCGATGATCTCACACTCACACCTAACCAGAAGAATTTGGTAGAAATTGTGAAGAAAGATGCATACAAAAACATTGAAAATTTAAAAGCAATTGATGAGGGTACATTGAACTCCATAAGCTTAGAAGCATGTATAAAATCAACACAAGAACAAGATGTGCAACATATTGATATCTCTGCAGAGAATGGTAATGATGGAATGCAAAATATTGAAATGAATGTTGATCCGGTGGAAGACATAGGAGAAATACCAGAAAACAATTATTGTCATTCAATAGAGAATCTCATAAATGTTGGTTATTTTGAAGGAGCTGAGTGGAGCACTTTAGTTGATTTACTGAGTCCTGATCCATTTATCTCTAGTTCAAATGTTAATGATGGAACGCAAAATGTTGAAATCAATGTTGATCGAGAGCCTGACATTAGAGAAATACCAGGAAACAGTTATGATGTTTTAGATGGTAATTTTGATGAAGGTGAGTGTAGCACTTTGGTTGATATGGTAATATCAAACATTGAGAAACCAAAAGCAGTGTGGTGTAAGATTCGTGCTATTGTGAAATGGAAAATATCAGGGAAAAGAAGAGTTGCAGCAGCTAGCCTAGAGGAATGA 1491 0.3514 MVSDNQFRRILSFGSNQNLGVTKQASNSGLKKMINALKMNDHDSLLIESYIREVVKDEVVRKLQEHLFSRDKNNDAGKSGSRFLELCFMNNNKLPIMTYTKTNIIPKDELFQVALFDVRSKSIVNDGPFSSIKIEICPIKDNSGWVKNKKFSLGAKAMENGEIIKEGRSKAFRVKDVRGEAYKKHYPPYLKDDVWRLKKISENGPFRDRLRSNGIHTVKDLLRLLITNESSLREKFGKIQKKCWYDIIEHARSCIVDDYMLYSYEMIGEPILLLFNVIYEVVGVTFDTQKFYLPDDLTLTPNQKNLVEIVKKDAYKNIENLKAIDEGTLNSISLEACIKSTQEQDVQHIDISAENGNDGMQNIEMNVDPVEDIGEIPENNYCHSIENLINVGYFEGAEWSTLVDLLSPDPFISSSNVNDGTQNVEINVDREPDIREIPGNSYDVLDGNFDEGECSTLVDMVISNIEKPKAVWCKIRAIVKWKISGKRRVAAASLEE 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03703 496 Pfam Calmodulin binding protein C-terminal domain 261 322 IPR046829 -
Vifa5g03703 496 PANTHER OS02G0177800 PROTEIN 26 137 IPR012416 GO:0005516
Vifa5g03703 496 Pfam Calmodulin binding protein central domain 190 254 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03703 Vifa-Chr5 1192782410 1192784559 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03703 24 329 Calmodulin-binding Proteins AT5G26920 29.428 2.28e-44 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03703 - - mtr:25499645 413.69