Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03695 ATGAGATTTGGGATGGTATCAGGTAAGCAAGCTCGTAAGGATCACAAACGCAGTAGTAAGAATCCTATTCTTGGGTCGAAACGGAATCATGGTGTTACAAAACAAACATCAAATAGACTTAAACGTATGCTTAAAAGGATGAATGCTCATGATTCCCTCCTTATGAAATCTTTCATTCGAGGAGAGGTGAGAGATGAGGTTGAAAGAAAATTCCAAGAGCTCTTAGTTTCAAGAGAAAAGATTAATGAAGGTGGAAGATCTGGAGCCAGATCCTTAGAGTTGTGTTTTATTAACAATAATAAGTTGCCAATTACGACTTATACTAAAACTAATATAATTCCAAATGATGAACCATTTCAAGTTGCATTATTTGATGTTAGATCTAAGTCAATAGTCAACGATGGTCCTTTCTCTTCAATAAAGATAGAGATTTGTCCCATCAAGGGTGAGTTTGAATCTGTTGATGATGAAGATTGGACTGAAAATGAATTCAATGGTAATATCTTGCATGAAAGAAAGAATAAAGAACCATTGTTGGTTGGAGATAGGTTTGTTACTCTTGAAAATGGAGTTGCTTCCATTTCTAAAATTATGTTCAATGATAATTCTGGATGGGTAAGAAACAATAAGTTCAGTTTGGGAGCGAAAGCTATGAAGAATGGAGAGAACATTAAGGAAGGTAGAAGTAAAGCTTTTAGGGTCAAAGATGTCAGAGGAGAAGCTTTCAAGAAACATTATCCTCCATTCTTGAACGACTATGTGTGGCGTTTGAAGCTAATTTCTAAAAATGGACCATTCCACAAGCGACTCCGTGACTACGAAATTCATACGGTTAAGGATCTTTTGAGGTTACTCATAATCAATGAAGCTTCACTACATCAGAAATTTGGCAAAATTCAGAACGAGTGCTGGTCTGATATTATCGAACATGCCCGGTCGTGTGTTGTAGATGATTTCAAGCTTTACGGCTATGAGATGATTGGACAACCAATACTTCTTCTGTTCAATGTGATCTTTGAAGTTGTTGGTGTGACATTTGATGCACAAGAGTTTTATTTACCAGATGATCTCACACTCACACCCAACCAGAAGAATTTGGTAGAAACTGTGAAGCAAGACGCATACCGAAACATTGAAAAGTTAAAAGCAATTGATGAGGCTGCATTGAACTCCATAAGCTTAGAAGCATGTATAAAATCAACACAAGAACAAGATGTGCAACATATTGATATCTCTGCAGAGAATGGAGCTGAGTGGAGCACTTTAGTTGATTTACTGAATTCTGATATGGAGATATCAAACAGTGAGAAACCAAAAGCCTTGTGGTGTAAGATTCGTGCTGTTGTGAAATTGGGAATATCAGTGAGAAGAATTGCAGCAACCAAGAGGAATGAAGAGCTGTCTTTTCATAAGCAGAGTTCTGGTGGTGAACTATTAGTATCGCCAGGGGGAGTTATTTTTGATTCGAGGAATTCGAGCCTGGTGGCCTTCCATTCTTGGAAGCAGGGCGGTTTTTTCTTAAAATATATTCCGAGAAAAAAGATCTTTATCGAAGTATTGTTTTGGGTCTGGCATCATGGTTGGGTCACTGCAACATTTCCTGTTACATTGGTGTTTGAAGCAATTCCTTCAAAATCTTCCATATCGGTTGCGCACTAG 1659 0.3767 MRFGMVSGKQARKDHKRSSKNPILGSKRNHGVTKQTSNRLKRMLKRMNAHDSLLMKSFIRGEVRDEVERKFQELLVSREKINEGGRSGARSLELCFINNNKLPITTYTKTNIIPNDEPFQVALFDVRSKSIVNDGPFSSIKIEICPIKGEFESVDDEDWTENEFNGNILHERKNKEPLLVGDRFVTLENGVASISKIMFNDNSGWVRNNKFSLGAKAMKNGENIKEGRSKAFRVKDVRGEAFKKHYPPFLNDYVWRLKLISKNGPFHKRLRDYEIHTVKDLLRLLIINEASLHQKFGKIQNECWSDIIEHARSCVVDDFKLYGYEMIGQPILLLFNVIFEVVGVTFDAQEFYLPDDLTLTPNQKNLVETVKQDAYRNIEKLKAIDEAALNSISLEACIKSTQEQDVQHIDISAENGAEWSTLVDLLNSDMEISNSEKPKALWCKIRAVVKLGISVRRIAATKRNEELSFHKQSSGGELLVSPGGVIFDSRNSSLVAFHSWKQGGFFLKYIPRKKIFIEVLFWVWHHGWVTATFPVTLVFEAIPSKSSISVAH 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03695 552 MobiDBLite consensus disorder prediction 7 21 - -
Vifa5g03695 552 MobiDBLite consensus disorder prediction 1 38 - -
Vifa5g03695 552 PANTHER OS02G0177800 PROTEIN 21 418 IPR012416 GO:0005516
Vifa5g03695 552 Pfam Calmodulin binding protein central domain 250 314 IPR046830 -
Vifa5g03695 552 Pfam Calmodulin binding protein-like N-terminal domain 92 236 IPR046831 -
Vifa5g03695 552 MobiDBLite consensus disorder prediction 24 38 - -
Vifa5g03695 552 Pfam Calmodulin binding protein C-terminal domain 320 382 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03695 Vifa-Chr5 1189508071 1189512009 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03695 41 386 Calmodulin-binding Proteins AT5G26920 36.827 4.40e-68 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03695 - - mtr:25499645 456.832