Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03693 ATGCCTAGCGCAACCTTCGACCTAGGAGCCGTTCCCTTCAACCCCGACGGATGGGGCCCACTCGAATCCACCGCCGACGACTCCAACGTCCCCTTCGCCCCATTCTCCCGTTCCGACAAGCTCGGCCGAATCGCTGACTGGACTCGCAACTTCAACAACCCGACCCGATCCAAAAACCCCGCCGACTCCGCCTTCGATTTCACCTCCGACGCTTCCTTCCCTTCATTTGCCGATGACGACTCATCTTTCCGATTAGTCGACGGTAAACCTCCGCCGCGTCCCAAATTCGGTCCCAAGTGGCGATTCCAACGCCAGCTTCAGCTTCCTCAGCGCCGCGACGAGGAGGTCGAAGCTAAGAAACGTGAAGCGGAGAAAGAACGAGCTCGTCGCGATCGGCATTACCAGAATCGGTCAAACCCTAGCAACCATCGCCGTGAGCTTTTCAAATCGTCGGTTGATATTCAACCGGAATGGAATATGCACGACCAGATCCCGTTCTCCACTTTCACCAAACTATCATTCACTGTCTCTGAGCCGGAAGATCTTCTCCTCTGCGGTGCTGTCGAGAGTTACGATAGGTCACATGATCGAATCGCTCCGAAAAATGAACGTAGACTCGAGAGGTTCAAGAATCGTAACTTCTTCAAAGTTACCACCACTGATGACCCTGTTATCCGTAGGCTTGCGAATGAGGATAAAGCCACGGTTTTCGCAACTGATGCTATTTTATCAACTCTCATGTGCGCTCCTAGGTCTGTTTACTCTTGGGATATTGTTGTTCAGCGAGTTGGGAATAAGCTTTTCTTTGATAAGCGCGATGGGTCGCAGTTGGATTTGCTTTCTGTTCATGAGACCTCTCAGGAGCCATTGCCTGAGGCGAAAGATGATATTAACTCTGCGCATTCGCTTAGTGTTGAGGCTTCTTATATCAATCAGAATTTCTCTCAGCAGGTTTTGATTAGGGATGGGAAAAAGGTTACTTTTGATGAGCCTAACCCTTTTGCTAATGAAGGTGAAGAGGTTGCTTCTGTTGGGTATAGGTATAGAAGGTGGAAGCTTGATAATGATATGTATCTTGTTGCTAGGTGTGAGGTGCATAGTGTTGTTGATGTGAATAACCAGAGGTCTTTCCTTACTTTGAATGCATTGAATGAGTTTGATCCAAAGTATTCTGGTGTTGATTGGAGGCAGAAGTTGGAGACACAGAGAGGTGCTGTTTTGGCTACTGAGCTTAAGAACAATGCTAACAAGTTGGCTAAGTGGACTGCACAGGCTCTTTTGGCGAGTGCTGATATGATGAAGTTGGGATATGTTTCTCGGATTCATCCCCGTGATCATTTTAACCATGTGATCTTGGCTGTTGTTGGATATAAACCAAAAGATTTTGCTTCACAGATTAATTTGAATCCGACCAATATGTGGGGGATTGTGAAGTCTATCGTGGACTTGTGCATGAAATTGAATGAGGGGAAATATGTTCTTGTGAAGGATCCATCTAAGCCCCAGGTTAGGATTTATGAGGTTCCGCCTGATGCATTTGAGAATGACTATGTGGAGGAGCCAATACCTGAAGAGGAGCAAGTCCAACCAAATGCAGATGGTGCTGACGATGCTGATGGTGTAGAGGCTTCTGCGGCTAGTACCAATGATGGAGAAGATAAGAAGGTTGAGGGTCAAGCTTAA 1683 0.4753 MPSATFDLGAVPFNPDGWGPLESTADDSNVPFAPFSRSDKLGRIADWTRNFNNPTRSKNPADSAFDFTSDASFPSFADDDSSFRLVDGKPPPRPKFGPKWRFQRQLQLPQRRDEEVEAKKREAEKERARRDRHYQNRSNPSNHRRELFKSSVDIQPEWNMHDQIPFSTFTKLSFTVSEPEDLLLCGAVESYDRSHDRIAPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDAILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAHSLSVEASYINQNFSQQVLIRDGKKVTFDEPNPFANEGEEVASVGYRYRRWKLDNDMYLVARCEVHSVVDVNNQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRIHPRDHFNHVILAVVGYKPKDFASQINLNPTNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFENDYVEEPIPEEEQVQPNADGADDADGVEASAASTNDGEDKKVEGQA 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03693 560 Coils Coil 111 136 - -
Vifa5g03693 560 PIRSF Transl_init_eIF3d 1 537 IPR007783 GO:0003743|GO:0005737|GO:0005852
Vifa5g03693 560 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 4 519 IPR007783 GO:0003743|GO:0005737|GO:0005852
Vifa5g03693 560 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 4 530 IPR007783 GO:0003743|GO:0005737|GO:0005852
Vifa5g03693 560 MobiDBLite consensus disorder prediction 519 560 - -
Vifa5g03693 560 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 7 507 IPR007783 GO:0003743|GO:0005737|GO:0005852
Vifa5g03693 560 MobiDBLite consensus disorder prediction 106 147 - -
Vifa5g03693 560 MobiDBLite consensus disorder prediction 1 30 - -
Vifa5g03693 560 MobiDBLite consensus disorder prediction 80 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03693 Vifa-Chr5 1188461129 1188462811 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03693 1 557 Eukaryotic Initiation Factors Gene Family AT4G20980 74.915 0.0 890
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03693 K03251 - gmx:100799613 919.072