Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03683 ATGAAGCACGTGGGTAATACTCCTTCAAAACCCACGAAGCTATACAGAGGGAAAAATGGGTTGCTGAGATACAGGCTTTGGCTTGGTACCTTTGTTACAGCAGAAGAAGCTGCTTTGGCTTACGACAAAGCTGTTTATAAGCTTCGTGGTGACTTTGCTAGGCTTAATTTCCCGAATTTCAAACACCATGGATCATGTATTGGCATTGGTGGTGAGTTTGGTGAGTATAAGCCTCTTCCTTCTTTTGTAGCCGCTAAACTTCAAGCTATTTGTGAAGGTTTAGCTGAGATGCAGAAACAGGGAAAGCCAGAGAAGTCTAAGAAAACACCTGCTCAGTTGAAAACTTCCTCCAAGGTGGTGCCTCCACTGGAGACGGTGGAGATAGAGAAGTCTGTTGATGACTTGAAGGGTCCAGGTTCAGAAGGATTTTGTAAGGTTGAAGTTTTAGAAGTTTGTTCATGCCTTAATTGTGAGTTTTCGAATGAGTTTGTTGACTTAAAGGTTCGAGTTAGGAAAATCTGA 522 0.4253 MKHVGNTPSKPTKLYRGKNGLLRYRLWLGTFVTAEEAALAYDKAVYKLRGDFARLNFPNFKHHGSCIGIGGEFGEYKPLPSFVAAKLQAICEGLAEMQKQGKPEKSKKTPAQLKTSSKVVPPLETVEIEKSVDDLKGPGSEGFCKVEVLEVCSCLNCEFSNEFVDLKVRVRKI 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03683 173 CDD AP2 25 59 IPR001471 GO:0003700|GO:0006355
Vifa5g03683 173 SUPERFAMILY DNA-binding domain 22 58 IPR016177 GO:0003677
Vifa5g03683 173 Gene3D AP2/ERF domain 7 59 IPR036955 GO:0003700|GO:0006355
Vifa5g03683 173 ProSiteProfiles AP2/ERF domain profile. 1 58 IPR001471 GO:0003700|GO:0006355
Vifa5g03683 173 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 23 117 - -
Vifa5g03683 173 SMART rav1_2 14 64 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03683 Vifa-Chr5 1185091683 1185092204 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03683 8 108 AP2-EREBP Transcription Factor Family AT1G78080 64.103 3.39e-40 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03683 K09286 - gmx:732559 152.14