Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03672 ATGCCGATCCCTATGAAGCACGTGGCAGAAGAAGCTGCTTTGGCTTACGACAAAGCTGTTTATAAGCTTCGTGGTGACTTTGCTAGGCTTAATTTCCCGAATCTCAAACACCATGGATCATGTATTGGCATTGGTGGTGAGTTTGGTGAGTATAAGCCTCTTCCTTCTTCTGTAGCCGCTAAACTTCAAGCTATTTGTGAAGGTTTAGCTGAGATGCAGAAACAGGGAAAGCCAGAGAAGTCTAAGAAAACACCAGCTCAGTTGAAAACTTCCTCCAAGGTGGTGCCTCCACTGGAGACGGTGGAGATAGAGAAGTCTGTTGATGACTTGAAGGGTCCAGAGTTGACTTGGTATTCCTTTGCTGAGTTTAAAGCATTCTTCATTTACAAGTGCAGGCTGCAGAGAATTAGATCATTTAGCTCTGATACGTCAAGAAAGAGCTGA 444 0.4437 MPIPMKHVAEEAALAYDKAVYKLRGDFARLNFPNLKHHGSCIGIGGEFGEYKPLPSSVAAKLQAICEGLAEMQKQGKPEKSKKTPAQLKTSSKVVPPLETVEIEKSVDDLKGPELTWYSFAEFKAFFIYKCRLQRIRSFSSDTSRKS 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03672 147 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 9 93 - -
Vifa5g03672 147 SUPERFAMILY DNA-binding domain 9 33 IPR016177 GO:0003677
Vifa5g03672 147 Gene3D AP2/ERF domain 7 34 IPR036955 GO:0003700|GO:0006355
Vifa5g03672 147 MobiDBLite consensus disorder prediction 73 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03672 Vifa-Chr5 1183932306 1183933852 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03672 8 83 AP2-EREBP Transcription Factor Family AT1G78080 75.000 1.51e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03672 K09286 - gmx:732559 123.635