Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03670 ATGCCGATCCCTATGAAGCACGTGGCAGAAGAAGCTGCTTTGGCTTACGACAAAGCTGTTTATAAGCTTCGTGGTGACTTTGCTAGGCTTAATTTCCCGAATCTCAAACACCATGGATCATGTATTGGCATTGGTGGTGAGTTTGGTGAGTATAAGCCTCTTCCTTCTTCTGTAGCCGCTAAACTTCAAGCTATTTGTGAAGGTTTAGCTGAGATGCAGAAACAGGGAAAGCCAGAGAAGTCTAAGAAAACACCAGCTCAGTTGAAAACTTCCTCCAAGGTGGTGCCTCCACTGGAGACGGTGGAGATAGAGAAGTCTGTTGATGACTTGAAGGGTCCAGGTTCAGAAGGATTTTGTAAGGTTGAAGTTTTAGAAGTTGTTCATGCCTTACTTCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCTCAGAGTTGACTTGGTATTCCTTTGCTGAGTTTAAAGCATTCTTCATTTACAAGTGCAGGCTGCAGAGAATTAGATCATTTAGCTCTGATACGTCAAGAAAGAGCTGA 540 0.4389 MPIPMKHVAEEAALAYDKAVYKLRGDFARLNFPNLKHHGSCIGIGGEFGEYKPLPSSVAAKLQAICEGLAEMQKQGKPEKSKKTPAQLKTSSKVVPPLETVEIEKSVDDLKGPGSEGFCKVEVLEVVHALLLSWLERRANNAKVSELTWYSFAEFKAFFIYKCRLQRIRSFSSDTSRKS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03670 179 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 9 99 - -
Vifa5g03670 179 Gene3D AP2/ERF domain 7 34 IPR036955 GO:0003700|GO:0006355
Vifa5g03670 179 SUPERFAMILY DNA-binding domain 9 33 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03670 Vifa-Chr5 1183780319 1183781865 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03670 8 83 AP2-EREBP Transcription Factor Family AT1G78080 75.000 4.34e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03670 K09286 - gmx:732559 123.635