Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03667 ATGGGTTTTTCTAGCTTTGTCCCATGCATTTTAATGCTTATATTTGGCACTGTTTCCATCGCTCCTTTTGCTTATTTTCTCGAACGTGATATGGTTCCAACAATGACCAAGCGGATTATGATTCAGATTTTTTTATCTTCAGTAACAGGAGTAACAGGAAATCAGGTTCTTTATTTTCTGGGACTAAAATATTCAACAGCAACAATTGCATGTGCACTCACAAACTTACTCCCAGCTTTCACATTTGTCCTTGCAATCTTGTGCAGGCAAGAGAATTTGGCCATAAAGAAAAAAAATGGTATTGCAAAGGTGGTGGGAACAGTGTTGTGTGTGGGAGGAGCAATTCTTTTGTCATTTTACCATGGGAAAGTGATTGGTATTGGAGAATCAAGTATTCACTGGGGCTATGCTGAGAGAATTCAAAGTGGTGATGGTGGTAACTCTTCTGGTTCTAGCTCGGGCTCTCTTTTAGGCCCGGTTCTGTTGATTCTTAGTGCTCTCATTTGGTCTTCATGGTTTATCATTCAGGCGGATATGAGCAAGAATTTTCCAGTGCCTTATACAAGCACAGCTTACATGTGTGTCTTGGCCAGCGTGCAGTGCGTGTTCATTGCTTTGTGTATTGATCACAAGGCTTCATCCTGGTCACTCCATGACACTATGAGACTCACATCTTCAATTTACGCGGGAGTAATTTGCACCGGGCTGACGTATTGTGTGATTTCATGGACGATAGAGAGAAAAGGGCCACTTTATGTGTCTGTATTCACTCCTCTGCAGCTTATTCTTACCGCGATTATTAGCTGGGCTTTTCTCAGTGAGAAGTTGTATCTCGGAACCGCGCTTGGATCGCTATTGATTGTTTTTGGGCTATATGGTGTGCTATGGGGTAAGAGCCAAGAAGGTGATAGCAACAAACTGGATGATGCTGCTGATCAAGATGAAGGTATCAAGAGAGATGATATGGAAATGCAATCTTATGGTAATGGCAATGGTATTGGTCACATGTGA 1011 0.4204 MGFSSFVPCILMLIFGTVSIAPFAYFLERDMVPTMTKRIMIQIFLSSVTGVTGNQVLYFLGLKYSTATIACALTNLLPAFTFVLAILCRQENLAIKKKNGIAKVVGTVLCVGGAILLSFYHGKVIGIGESSIHWGYAERIQSGDGGNSSGSSSGSLLGPVLLILSALIWSSWFIIQADMSKNFPVPYTSTAYMCVLASVQCVFIALCIDHKASSWSLHDTMRLTSSIYAGVICTGLTYCVISWTIERKGPLYVSVFTPLQLILTAIISWAFLSEKLYLGTALGSLLIVFGLYGVLWGKSQEGDSNKLDDAADQDEGIKRDDMEMQSYGNGNGIGHM 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03667 336 SUPERFAMILY Multidrug resistance efflux transporter EmrE 195 300 - -
Vifa5g03667 336 SUPERFAMILY Multidrug resistance efflux transporter EmrE 12 120 - -
Vifa5g03667 336 PANTHER WAT1-RELATED PROTEIN 2 302 IPR030184 GO:0016020|GO:0022857
Vifa5g03667 336 Pfam EamA-like transporter family 157 295 IPR000620 GO:0016020
Vifa5g03667 336 Pfam EamA-like transporter family 8 118 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03667 Vifa-Chr5 1182296724 1182299822 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03667 14 331 Nodulin-like Gene Family AT1G09380 52.424 6.34e-119 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03667 - - gmx:100801512 432.95