LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa5g03638	ATGGATCCTAATCAATTTAATTATCAACAATCTATGTTCAATTTCATGCAAAATTTTCAAAATCCTAATCCTCAAAATTCTCAATTCCCATCGATGTCAACAAACTCCGTCGCTTTTTTTCCGTCATCAACCGGAAACACTCCGCCACATTTTTTCCGTCACCAAACTCCACCATATGGTCAACCATCTATGGAATTTTTTTTTCATGAACCGGAAACACCGATTGTGTCTATGTCCGAAAGTCAAGTTCCACCATTTTCAACTCAAGTCGGTATTGAAAAAGAAGAAAGTCGCCCTGTTAAAAAAAAAGCTCGAGAGGTATTTTCAAAGGATGAAGATATACTTCTTATCCAATCATGGCTCAATGTTTCAAAGGATTCAATTGTGGGAGTTGATCAAAAAGCTGAGAGTTTTTGGTTAAGAATCACTACCAATTATAACGAGTATCGTGGACAATCGCGGGAAAAGCTACCTGTTAATGGAAAGAAAAGTGGGACTTCAGAGAAAGATATCTTGGCTGCTGCATATGCATTTTTTGCTCAAGATGAAGGTACACCATTCAATCTTGAGTACGCATGGCGATTGTTAAAGGATGAACCTAAATGGATAGGAGCATCGACCGAAAATTCTTCAAAAAGAACAAAGAATTCTGCTAGTGGGGCACACTCATCATCGTCTAACCTCGCGACACCTTCAAGTTATGAGTTTAACTCATCATCACCAATGGAGCGTCCAATGGGACAACAAGCAGCAAAAAGAAAGAGTAAGGCAAAGGAAAATGCATCTGAATCACCTTCTAATGTTGTGCAAGAAACATGGAATAAAAGAGTAGAGGCAATGGAAAGACTATATCAATGTAAGGAGGACGGGATGGAGTATAAGGCAATGCAATTACTCTCGAAAGACACTTCTATGATGAATGATAGTCAACGAGATATTCATGAAAAATATTGTAATAAGTTGGAAAAAAATATGGATTTTAGTTATGATGAAAAGATGTAG	1002	0.3743	MDPNQFNYQQSMFNFMQNFQNPNPQNSQFPSMSTNSVAFFPSSTGNTPPHFFRHQTPPYGQPSMEFFFHEPETPIVSMSESQVPPFSTQVGIEKEESRPVKKKAREVFSKDEDILLIQSWLNVSKDSIVGVDQKAESFWLRITTNYNEYRGQSREKLPVNGKKSGTSEKDILAAAYAFFAQDEGTPFNLEYAWRLLKDEPKWIGASTENSSKRTKNSASGAHSSSSNLATPSSYEFNSSSPMERPMGQQAAKRKSKAKENASESPSNVVQETWNKRVEAMERLYQCKEDGMEYKAMQLLSKDTSMMNDSQRDIHEKYCNKLEKNMDFSYDEKM	333

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa5g03638	333	MobiDBLite	consensus disorder prediction	206	245	-	-
	Vifa5g03638	333	Pfam	No apical meristem-associated C-terminal domain	186	311	IPR029466	-
	Vifa5g03638	333	MobiDBLite	consensus disorder prediction	206	272	-	-
	Vifa5g03638	333	PANTHER	-	92	323	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa5g03638	Vifa-Chr5	1173731888	1173732961	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vifa5g03638	101	256	Glutathione S-transferase Gene Family	AT5G41240	32.105	2.93e-17	80.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa5g03638	-		-	cam:101493921	324.324