Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03633 ATGATAATGAAGTTGATTCTCATGTTAACGTCAAGTGTCTTCTTCCCACCTCAACCTCTCTTGGTTCCACTCACTCTTATTCAAGGAGCTGACTCTAAAGGAGCAGTATGTTTGGATGGAACATTACCTGGTTACCACTTCCATCCTGGATCTGGATCTGGTGCAAATAATTGGCTAGTTAATTTAGAGGGAGGAGGATGGTGTAACAACATCAGAAGTTGTGTGTTTAGAAAAACTACTCGTCGCGGTTCCACGAAATACATGGAAAAGCAAATCCCATTCACAGGGATATTGAGCAATAAAGCTGAAGAAAATCCTGATTTCTTTAACTGGAATAGAGTCAAAGTGCGGTATTGCGATGGTGCATCTTTCGCTGGAGACAGTCAGAATGAGGCTGCAAACCTTCAATTTAGAGGACAAAAAATATGGCAAGCTGCAATAGAGGAATTAATGTCTAAAGGAATGAAGAACGCGAAACAGGCTCTTTTGTCTGGATGTTCTGCGGGCGGTCTGGCAACTATAATACATTGTGACGAATTCGGAAGCTTGTTTCAAAAATCTACCAAAGTGAAATGTTTGAGTGATGCAGGGTTTTTTCTTGACGCAACTGATGTATCTGGTGGACGCACGTTGAGGAAAATGTTCGGAGGCGTTGTTAGCTTACAGGAAGTGCAAAAGAATCTGCCAAACAGTTGTCTAGACCACCTCGATCCAACTTCGGGTAATTTTCAAATTCTTGCTTCTTTCCCCGAAAACTTGATCGATCATATTCAAACTCCGTTGTTTCTGCTGAACGCAGCTTATGACGGATGGCAGTTGTATGAAAGCTTAACCCCGTCTACAGCCGATCCACATGGCTATTGGAATGCTTGTAAATTGAATCAGACGAAATGTAACTCGACCCAAATTGAGTTTCCTCCAAAGCTTCTCAACGACATCTCAATCGGGATTATACATAAACCTCTTGTTTTACGCATTGTCAATCCGAGAGACAAGATACATGGTTTGCTAGTGACTCTCCGCTCCTTAACAACACGCGGATTGCGAATGCAGTTGGAAATTGGTTTTCCGATCGTCAAGTTGTTAAAGCTATTGACTGTCCTTATCCTTGTGACAAAACCTGCCATAGTCTGTTCACCAAGCGATCGTTGTGATTGCAATATGTGCATTTGTCAATTTTATAGAGAAAACATTCTTGGCCAAGGCTACTACAATTCATTATAA 1224 0.4158 MIMKLILMLTSSVFFPPQPLLVPLTLIQGADSKGAVCLDGTLPGYHFHPGSGSGANNWLVNLEGGGWCNNIRSCVFRKTTRRGSTKYMEKQIPFTGILSNKAEENPDFFNWNRVKVRYCDGASFAGDSQNEAANLQFRGQKIWQAAIEELMSKGMKNAKQALLSGCSAGGLATIIHCDEFGSLFQKSTKVKCLSDAGFFLDATDVSGGRTLRKMFGGVVSLQEVQKNLPNSCLDHLDPTSGNFQILASFPENLIDHIQTPLFLLNAAYDGWQLYESLTPSTADPHGYWNACKLNQTKCNSTQIEFPPKLLNDISIGIIHKPLVLRIVNPRDKIHGLLVTLRSLTTRGLRMQLEIGFPIVKLLKLLTVLILVTKPAIVCSPSDRCDCNMCICQFYRENILGQGYYNSL 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03633 407 Pfam Pectinacetylesterase 19 307 IPR004963 GO:0016787
Vifa5g03633 407 PANTHER NOTUM-RELATED 11 305 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03633 Vifa-Chr5 1173228559 1173231161 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03633 6 305 Carbohydrate Esterase AT1G57590 66.333 3.88e-151 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03633 K19882 - gmx:100785270 487.263