Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03632 ATGATATTGAAGTTGATTCTCATATTAACATTTTCTTTTGTTATCTCAGTGGTTCCAGCTCAAGTGTCTTCTTCCCAACCTCAACCTCTCGCGGTGCCTCTCACTCTTATCCAAGGAGCTGATTCTAAAGGAGCAGTATGTTTGGATGGAACATTACCTGGTTACCACTTCCATCCTGGATTTGGATCTGGTGCGAATAATTGGTTAGTTAATTTAGAGGGAGGAGGATGGTGTAACGACATCAGAAGTTGTGTGTTTAGAAAAACTACTCGTCTTGGTTCATCAAAATACATGGATAAGCAAGTAACATTCACAGGGATATTGAGCAATAAAGCCGAAGAAAATCCTGATTTCTTCAACTGGAATAGAATCAAAGTGCTATACTGTGATGGCGCATCTTTCGCTGGAGACAGTCAAAATAAGGCTGCAAACCTTCAATTTAGAGGACAAAAAATATGGCAAGCTGCAATAGAGGAGTTAATGTCCAAGGGAATGAAGAACGCCAAACAGGCTCTTTTATCTGGATGCTCTGCGGGCGGCCTGGAAACTATAATACATTGTGACGAATTCGGAAGCTTGTTTCCAAAATCTACCAAAGTGAAATGTTTCAGTGATGCAGGATTCTTTCTTGATGCAACCGATGTATCTGGCGGACGCACATTGAGGAAAATGTTCGGAGGTGTTGTTAGCTTACAGGAAGTGCAAAAAAATCTGCCAAAGAGTTGTCTTGACCACCTCGATCCAACTTCGTGCTTCTTTCCTGAAAACTTGATTGATCATATTCAAACTCCGTTGTTTCTGCTGAATGCTGCTTATGATGGATGGCAGTTGTATGAAAGCTTAACCCCGTCTACAGCCGATCCACATGGTTATTGGAATGCTTGTAAATTGAATCCGACAAAATGTAACTCGACCCAAATTGAGTTCCTCCAAAAATTCAGGAATCAAATGCTGAATGACATAAAAAACTTCTCAACGGCATCTCAATCGGGATTATACATAAACTCTTGTTTTACGCATGGTCAATCCGAGAGACAAGATACATGGTTTGCTAGTGACTCTCCTCTCCTTAACAACACGCGGATTGCGAATGCAGTTGGAAATTGGTTTTTCGATCGTCAAGTTGTTAAAGCTATTGATTGTCCTTATCCTTGTGACAAAACCTGCCATAGTTTGTTCACCAAGTGA 1188 0.4082 MILKLILILTFSFVISVVPAQVSSSQPQPLAVPLTLIQGADSKGAVCLDGTLPGYHFHPGFGSGANNWLVNLEGGGWCNDIRSCVFRKTTRLGSSKYMDKQVTFTGILSNKAEENPDFFNWNRIKVLYCDGASFAGDSQNKAANLQFRGQKIWQAAIEELMSKGMKNAKQALLSGCSAGGLETIIHCDEFGSLFPKSTKVKCFSDAGFFLDATDVSGGRTLRKMFGGVVSLQEVQKNLPKSCLDHLDPTSCFFPENLIDHIQTPLFLLNAAYDGWQLYESLTPSTADPHGYWNACKLNPTKCNSTQIEFLQKFRNQMLNDIKNFSTASQSGLYINSCFTHGQSERQDTWFASDSPLLNNTRIANAVGNWFFDRQVVKAIDCPYPCDKTCHSLFTK 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03632 395 PANTHER NOTUM-RELATED 17 391 IPR004963 GO:0016787
Vifa5g03632 395 Pfam Pectinacetylesterase 26 375 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03632 Vifa-Chr5 1173207852 1173210189 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03632 27 393 Carbohydrate Esterase AT3G62060 67.935 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03632 K19882 - gmx:100785270 629.017