Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03630 ATGTCAAAGGCGCAGACGGAAAAACAACTCTTCTGCACTTTGTTGTACAAGAAATCATCAGAACTGACACAGTTGCGACAAGGCCGCACCAGCACCGGCTACGATTCCACCCTCCGGCTCGCGAAATCTGCGAACAGCTTCATGGCAAACGACTCTCCAAATCGCGATTTCGACGACATACTTCCCTCCACTGTAAAACATACGCGCAAATCACCGAAAACATCACCCTTCTGCAACGAAACCGAAGCAGCATCAACAACACCTCCGACCCATCAACACCAACTGCCATTAACACCGAGGGGGGACAACACAATAATAAACTCTTTCTTTCCTTCTAACCTCACTCTCTCTCCCCAAAAACACTACACTACATTGCGCTACTGTCAAAGTGTCAACTATCCATCTATTCTCTACCCACCAAAAAAAAACCAACTAAAACAAAAACCAAAACTTCCAATTCCAAAATTCCCTCTAACGTTCTTCCTTTCCGTGACACCAAAATCAAATCCAATACTTCACCTAAACCCAGCTCATCTTCTTCCAAACTCCTCGCCGTCGCCATTGCTTCCGTTCCCGCCGCCTCCTCCACCTTCTAGAAAGCATTGGGAGATTCCAGACCTGTTAACACCAATTGCTGAAACACCAAGTGTTTTGATTCAACATGGCGTTGTATCTCAAAGGAAACAATGGGAAATACCGGTTCTTTCCACACCAATTGCACCTTCTCTTAAAGTTTCAGCCCCACCACCACCGGCATTGTCACTGCGACAACGGAAGCAATGGGAAGTACCTTCTCCAACAACTCCTGTCGGTCAACCGGTGGTTTGTAGGCCACCGAAACTGGAACCTCTTTCAAGGCCGTTTGTGTTGCAAACCCCTCCAAATACAGTGGTTTCTCCTGTTGAATTGCCACCTAGTTTTGAGGAGAATGCAGAAGAGGTTTTGAAACCGAAGTTGAAGCCTTTACATTGGGATAAAGTGAGGGCTAGCTCTGATCGTGAAATGGTTTGGGATCATTTGAGGTCCAGCTCTTTTAAGTTGAATGAAGAAATAATAGAAACATTATTTGTGGTGAACACGCCGAATCCAAAACCAAAGGATGCTACTCCACGATCAGTTCTTGCACCTCAATATCACGAGGATAGGGTGTTGGATCCTAAAAAGTCTCAAAATATTGCTATCTTACTTCGAGCTGTTAATGTTACGGTAGAGGAAGTGTGTGAAGCGCTGTTAGAAGGTGTTATTGATACACTTAATACCGAACTGCTTGAAAGCTTGTTAAAAATGGCTCCAAGCAAGGAAGAAGAACGCAAATTGAAGGAATATAAAGAGGACACTCCAAACGAGCTTGGTCCTGCTGAGAAGTTTTTGAAGGCAGTGCTTGATGTACCTTTCGCATTTAAAAGGGTTGAAGCTATGCTTTACATAGCCAATTTCGAGTCTGAAGTGGAGTATCTTCGGAAATCGTTTCAAACTCTAGAGGTTGCATGTGAAGAGCTGCGAAACAGTAGAATGTTCTTGAAGCTACTAGAAGCTGTACTGAAAACCGGGAACCACATGAATGTTGGAACAAACTGA 1578 0.4436 MSKAQTEKQLFCTLLYKKSSELTQLRQGRTSTGYDSTLRLAKSANSFMANDSPNRDFDDILPSTVKHTRKSPKTSPFCNETEAASTTPPTHQHQLPLTPRGDNTIINSFFPSNLTLSPQKHYTTLRYCQSVNYPSILYPPKKNQLKQKPKLPIPKFPLTFFLSVTPKSNPILHLNPAHLLPNSSPSPLLPFPPPPPPSRKHWEIPDLLTPIAETPSVLIQHGVVSQRKQWEIPVLSTPIAPSLKVSAPPPPALSLRQRKQWEVPSPTTPVGQPVVCRPPKLEPLSRPFVLQTPPNTVVSPVELPPSFEENAEEVLKPKLKPLHWDKVRASSDREMVWDHLRSSSFKLNEEIIETLFVVNTPNPKPKDATPRSVLAPQYHEDRVLDPKKSQNIAILLRAVNVTVEEVCEALLEGVIDTLNTELLESLLKMAPSKEEERKLKEYKEDTPNELGPAEKFLKAVLDVPFAFKRVEAMLYIANFESEVEYLRKSFQTLEVACEELRNSRMFLKLLEAVLKTGNHMNVGTN 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03630 525 SUPERFAMILY Formin homology 2 domain (FH2 domain) 192 523 - -
Vifa5g03630 525 SMART it6_source 309 525 IPR015425 -
Vifa5g03630 525 MobiDBLite consensus disorder prediction 65 96 - -
Vifa5g03630 525 MobiDBLite consensus disorder prediction 67 96 - -
Vifa5g03630 525 ProSiteProfiles Formin homology-2 (FH2) domain profile. 309 525 IPR015425 -
Vifa5g03630 525 Gene3D Formin, FH2 domain 307 525 IPR042201 -
Vifa5g03630 525 PANTHER FORMIN-RELATED 46 525 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vifa5g03630 525 Pfam Formin Homology 2 Domain 316 524 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03630 Vifa-Chr5 1172628259 1172638645 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03630 275 525 FH2 protein (formin) Gene Family AT3G25500 73.541 1.09e-114 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03630 - - gmx:100802678 526.168