Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03577 ATGCTTATTGCAATGCTTTTTATGCAGCAAGCTATCAAAGGACTCGTGGACGAGTTTCGCATACCGAAGAGAGAAGATACGAAATCGATTGAGTTCTTACCGTCGTGGAGGTTTGCTAATGGGATGTTTGCTTTGGTCCTTTCATTTGGCCTTCTCCTCACTGCATTAAAAAGCCGAAAAGCTAGATCATGGCGCTATGGCAGTGGTTGGCTTCGTAGTCTTATAGCTGACTACGGTGTGCCGCTTATGGTCCTAGTTTGGACAGGTGTATCCTACATGCCAACTGCAAGTGTTCCAAACGGTATTCCAAGACGCCTCTTTAGTCCGAATCCTTGGTCGCCCGGTGCCTATGACAATTGGACTGTCGTTAAGGATATGGTTCAAGTTCCTGTTGTTTTCATAATCGGAGCATTTATACCAGCAACTATGATCGCCGTGCTTTATTACTTCGATCATAGCGTTGCATCTCAGCTTTCTCAGCAAAAAGAGTTCAATTTGAGAAAACCATCTTCTTACCATTATGATTTACTCCTTTTGGGATTTTTGACGTTATTGTGTGGCCTTATTGGAATTCCTCCGGCAAATGGAGTCATACCGCAATCTCCGATGCATACGAAAAGCCTCGCAACGCTTAAACATCAGTTGCTTCGTAACAAACTCGTGATAACTGCTCGAAAAAGTATCGGTAAGAATGCTAGTTTAGGACAGTTATATGGCAATATGCAAGAAGTATACCATCAAATGCAGACACCTCTTATTTACCAGGACCCTTCCACTCGAGCACAAGGACTAAAAGAATTGAAAGAAACAACCATTCAAGCGGCTACAAGTATGGGAAGTGTGGACGCCCCGGTTGACGAGTCTATATTCGATGTCGAGAAAGAAATAGACGACCTGCTACCTGTTGAGGTAAAAGAACAACGCGTCAGTAACTTGCTTCAATCAGTAATGGTTGGAGGATGTGTTGCAGCCATGCCTATTCTCAAGAAAATCCCAACTTCAGTCCTTTGGGGTTACTTCGCATTCATGGCAATTGAAAGTTTACCTGGAAATCAGTTCTGGGAAAGGATCTTGTTACTCTTCACCGCACCGAGCAGAAGATTCAAGGTGCTTGAAGATTACCATGCTACTTTTGTCGAAACAGTTCCTTTCAAAACAATAGCGACATTCACAATTTTCCAAACCATTTATCTACTGATATGTTTTGGACTAACTTGGGTACCTATTGCTGGAGTCATGTTTCCTTTGATGATCATGCTCTTAGTTCCGGTTCGACAATTCTTTCTTCCCAAATTTTTCAAAGGTGCGCATCTTCAAGACTTGGATGCAGCGGAATACGAAGAGCAAACCGCTTTACCATTCAACCTTGCATCGCAATCGGAGTTTGGAGCTGGTGTTTCTCATATTGGAGAAGGTGAGATATTCGATGAAGTTATCACTAGAAGCCGTGGTGAGTTTAGGCATACTATTAACAGTCCAAAGATCAATAGCTCCACTCCAACACCAAGAAGTGATCCTAAGAGCCGTCTTAGCCCGCGCGTCTCTTTTAATTCTCGGGTGGGCGAGCTCACGGCGGAGCAAAGTCCTCGGTCGGGTGCAAGAGGACCTAATAGTCCGATAATGCCTAGAGAAATGAGGTTGTCGAATCGGGGAATAAGTCCTCTCAAACCTGACTCAAAACAGCAAGACAAAAAATGA 1698 0.437 MLIAMLFMQQAIKGLVDEFRIPKREDTKSIEFLPSWRFANGMFALVLSFGLLLTALKSRKARSWRYGSGWLRSLIADYGVPLMVLVWTGVSYMPTASVPNGIPRRLFSPNPWSPGAYDNWTVVKDMVQVPVVFIIGAFIPATMIAVLYYFDHSVASQLSQQKEFNLRKPSSYHYDLLLLGFLTLLCGLIGIPPANGVIPQSPMHTKSLATLKHQLLRNKLVITARKSIGKNASLGQLYGNMQEVYHQMQTPLIYQDPSTRAQGLKELKETTIQAATSMGSVDAPVDESIFDVEKEIDDLLPVEVKEQRVSNLLQSVMVGGCVAAMPILKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRFKVLEDYHATFVETVPFKTIATFTIFQTIYLLICFGLTWVPIAGVMFPLMIMLLVPVRQFFLPKFFKGAHLQDLDAAEYEEQTALPFNLASQSEFGAGVSHIGEGEIFDEVITRSRGEFRHTINSPKINSSTPTPRSDPKSRLSPRVSFNSRVGELTAEQSPRSGARGPNSPIMPREMRLSNRGISPLKPDSKQQDKK 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03577 565 PANTHER ANION EXCHANGE PROTEIN 1 450 IPR003020 GO:0005452|GO:0006820|GO:0016020
Vifa5g03577 565 MobiDBLite consensus disorder prediction 489 565 - -
Vifa5g03577 565 Pfam HCO3- transporter family 302 392 IPR011531 GO:0006820|GO:0016020
Vifa5g03577 565 Pfam HCO3- transporter family 41 213 IPR011531 GO:0006820|GO:0016020
Vifa5g03577 565 MobiDBLite consensus disorder prediction 489 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03577 Vifa-Chr5 1163401495 1163403976 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03577 1 537 Antiporters AT3G62270 79.926 0.0 864
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03577 K24194 - gmx:100776705 1006.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03577 5 1163401495 1163403976 Vifa5g03577 5 1163401495 1163403976 ECH