LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa5g03553	ATGGTATCGATAATCATGAATTCTGAGCTCTACTTAGCTGTGACAGGTTTTCTTATTTTAGAAGGGGACAATCTTAACAAACTGGTTCCAAATGTAGAAATTCACATGGGACAGTTAACCATTGGTGGGACAACATTGTTTACTATGGTTACTTGTCTTGTTATTTTGCCTACTGTTTTGCTTGAGGATATAAGTTTGTTGTCTTATGTTTCTGCTGGTGGTGCTTTGGCTTCTTCGGTTTTCATTGTTTCGTTGTTGTGGAATGGTGCAATTGATGGAACTGGGTTTCATGGAAAAGGAAGGGTTTTCAATTTGAGTGGAATTCCTTCTGCTGTTAGTTTGTATGCTTTTTGTTATAGTGCTCATCCTGTGCTTCCTACTCTCTACAATTCTATGAAGAACAAAACTCATTTCTCTCGGGTCCTAATTATAAGCTTTTCAGCATGCACGTTTGGTTATGCAGCAGCAGCGATTCTCGGCTACTTAATGTTCGGACAAGAAGTCGAATCACAAGTAACTCTAAATCTCCAAACAGGAAAGTTAAGTTCAAGAGTAGCAATATACACAACCTTAGTAAATCCAATAGCAAAATATGCATTAATGCTTACACCAGTAATAAATGCAATAAAAGCAAAAGTTTCATGCAACAAAAGGGTCACACATATGATTATTAGTACATCTTTACTAGTAGGTTCTCTTGGTATAGCAGTGACAATTCCTTTATTTGGATACCTTATGTCACTTGTTGGAGCATTGTTAAGTGTCTCAGCTTCAATTTTAGTGCCATCCATTTGTTACTTGAAGATTTCAGGAGCTTACAAGAGATTTGGGAGTGGAATGATTATTAATTATTCCATAATTGTTATGGGAGTTGCTATTGCTGTTTTTGGTACATATAGATCTCTTGTGGATATTATTCAAAACTTGTGA	930	0.3613	MVSIIMNSELYLAVTGFLILEGDNLNKLVPNVEIHMGQLTIGGTTLFTMVTCLVILPTVLLEDISLLSYVSAGGALASSVFIVSLLWNGAIDGTGFHGKGRVFNLSGIPSAVSLYAFCYSAHPVLPTLYNSMKNKTHFSRVLIISFSACTFGYAAAAILGYLMFGQEVESQVTLNLQTGKLSSRVAIYTTLVNPIAKYALMLTPVINAIKAKVSCNKRVTHMIISTSLLVGSLGIAVTIPLFGYLMSLVGALLSVSASILVPSICYLKISGAYKRFGSGMIINYSIIVMGVAIAVFGTYRSLVDIIQNL	309

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa5g03553	309	Pfam	Transmembrane amino acid transporter protein	13	301	IPR013057	-
	Vifa5g03553	309	PANTHER	AMINO ACID TRANSPORTER	2	299	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa5g03553	Vifa-Chr5	1157764956	1157766692	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vifa5g03553	1	306	Amino Acid or Auxin Permease AAAP Family	AT3G28960	55.016	9.92e-113	330

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa5g03553	K15015		-	gmx:100784690	462.225