Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03464 ATGGCTTTAGAAAAAGATGAAGAAGAAGAAATAGTTGTGATGAACATGGAGAATTTTCAAGAGATCCATGATGAGAAACAACAAAAGTTTAGAAGAAACGATTCTCTTGAAATTGAATCTTGCACTACCTCTCATGTTCATCACTCTAAAGGGCCATCAATGGCTATAATATTGCAACTGGCGTTTCAAAGTCTCGGAATAGTTTATGGAGACATCGGAACTTCCCCGTTGTACGTGTTTTCAAGCGTCTTCCCGAACGGTATAAAACACAACGATGATATATTAGGAGTCCTTTCCTTAATATTTTACACTCTCACTCTTATTTCTCTTCTCAAGTACGTCTTTGTCGTCTTAAGAGCCACCGATAACGGCGATGGTGGAACGTTTGCTTTGTACTCTCTGATATGCCGTTACGCGAAAGTGGGACTAATTCCGAATCAACAACTAGAGGATGCAGAGGTGTCTAATTATAAGCTGAAATTGCCAAACAACCGTGAAAAGAGAGCATCCAAGCTTAAATCTATCCTTGAGAATAGTCACTTTATGAAGATCTTTCTGTTGTTTACTACTTTGCTTGGCACTTCCATGGTAATTGGTGATGGTGTTCTCACACCTTGCATATCTGTTTTATCAGCAGTGGGAGGGCTTAAGGAAGCTACTAGCAAAATAACTGAGGATTGTGCATATGCAGATCAAATTGTTTGGATATCCGTGGCAATCTTAATTGGTCTTTTCATGGTTCAGAGATTTGGAACTGATAAAGTAGGTTACAGTTTTGCTCCCATAATCTGTATATGGTTCGCTCTCATTGCTGGGATTGGTATGTACAATTTCATCAAGCATGATACATCGGTTATAAAAGCGTTGAATCCGAAATACATAGTAGATTATTTCATCAGGAATAAAAAACATGCTTGGATTTCTCTCGGTGGCGTTGTCCTCTGTACAACAGGAACTGAAGCTTTATTTGCAGATGTTGGACATTTCACAGTTAGGTCTATACAGATAAGTATGTGTTGTGTTACTTATCCTGCTCTTATTTTGGCTTATGCTGGACAAGCCTCGTTTCTTCGCAAAAACAACGGTCTTGTTAGTGCCACATTCTATAAGTCTATACCAGCCTCTATGTATTGGCCAATGTTTGTGGTTGCTGTTTTGGCAGCAATAATAGCTTCTCAAGCCATGATTTCAGGGACTTTTTCTATAATCCAACAATCTCTATCATTGGGATGTTTTCCTCGCGTGCGAATCGTACATACATCAGCAAAGTATGAAGGACAAGTTTATATCCCAGAAGTTAACTACATCCTCATGATTGCTTGTATTGCCATCACTGTTGGCTTTAAAACCACAACCAAAATTGGCAATGCCTATGGGATAGCAGTGGTGTTTGTGATGACACTAACATCTGCATTTCTCACACTAATCATGATCGTGATATGGAAAACTCACATTCTTTTGATCATTAGCTATGTTCTCATCATTGGTTCGGTGGAACTTGTTTATTTAAGCTCAGTTTTATACAAGTTCGACCAAGGAGGGTATCTTCCTCTTGCGTTTTCCGCAATTCTAATGTTCATCATGTTCGTTTGGAATACCGTGTATCGAAGAAAGTACTTTTACGAACTTGATCACAAGATTTCACCTGAAAAGTTCAGAGAAGTTGCTTGTGACACAAGTTTATGTCGATTTCCTAGTCTCGCAGTGTTTTACTCTGAGCTTGTTCAAGGTATTCCACCAATTTTCAAGCATTATGTTGCAAATGTTCCTGCACTAAACTCTGTCCTTGTCTTTGTTTCCATTAAATCATTGCCTATTAGCAAAGTCGCAATAGGAGAAAGGTTCCTTTTTCGTCGAGTACAACCTAAAGAATTCAATGTATTCCGATGTGTTGTTAGATATGGATACACTGATGTCCGCAATGAGAAAGAGCCTTTTGAAAAGTTAATGGTTGAGAGGTTGAAGGAGTTTATTGTTAAGGAATATTATTGGTCTCAGAAAATGATACAAGATGGTGAGACAGACGAAAATTTGAATGTTGATAAATCACAAGAAATTAGTGATGAAGGAAGAGTTAAAGAGGCAATTGAAAAAGAGATTGAGACAATTGAGAAAGCATCTAGAGCTGGTGTTGTCCATTTGATTGGTGAAAATGAGGTGATTGCTAGTAAAGGAGCTGGTTTTGGAAAAAGACTTTTGATTGATTATGCTTACAATTTCTTGAAGAAAAATTTGAGGCAGAGTGAAAAGTTATTTGATATTCCTCACAAACGTATGGTGAAAGTTGGAATGACTTATGAACTTTAA 2307 0.378 MALEKDEEEEIVVMNMENFQEIHDEKQQKFRRNDSLEIESCTTSHVHHSKGPSMAIILQLAFQSLGIVYGDIGTSPLYVFSSVFPNGIKHNDDILGVLSLIFYTLTLISLLKYVFVVLRATDNGDGGTFALYSLICRYAKVGLIPNQQLEDAEVSNYKLKLPNNREKRASKLKSILENSHFMKIFLLFTTLLGTSMVIGDGVLTPCISVLSAVGGLKEATSKITEDCAYADQIVWISVAILIGLFMVQRFGTDKVGYSFAPIICIWFALIAGIGMYNFIKHDTSVIKALNPKYIVDYFIRNKKHAWISLGGVVLCTTGTEALFADVGHFTVRSIQISMCCVTYPALILAYAGQASFLRKNNGLVSATFYKSIPASMYWPMFVVAVLAAIIASQAMISGTFSIIQQSLSLGCFPRVRIVHTSAKYEGQVYIPEVNYILMIACIAITVGFKTTTKIGNAYGIAVVFVMTLTSAFLTLIMIVIWKTHILLIISYVLIIGSVELVYLSSVLYKFDQGGYLPLAFSAILMFIMFVWNTVYRRKYFYELDHKISPEKFREVACDTSLCRFPSLAVFYSELVQGIPPIFKHYVANVPALNSVLVFVSIKSLPISKVAIGERFLFRRVQPKEFNVFRCVVRYGYTDVRNEKEPFEKLMVERLKEFIVKEYYWSQKMIQDGETDENLNVDKSQEISDEGRVKEAIEKEIETIEKASRAGVVHLIGENEVIASKGAGFGKRLLIDYAYNFLKKNLRQSEKLFDIPHKRMVKVGMTYEL 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03464 768 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 46 767 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa5g03464 768 Pfam K+ potassium transporter 61 638 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa5g03464 768 NCBIfam potassium uptake protein 60 767 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03464 Vifa-Chr5 1139585404 1139588372 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03464 7 768 Inorganic Solute Cotransporters AT4G13420 53.224 0.0 841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03464 K03549 - qsu:112004789 1112.83