Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03462 ATGGGCTTAGAAGACGAGGTAGTTGTGAACATGGACAATGTAGAAAAGAACCATTCGAAAAAATATAAAAGAAATGATTCACTTGAAATGGAAGCTGGAATCGCCTCTCACAGCCGTGACTCGAAGGATGAATCAACAGCCTTAATGCTACAACTAGCGTTTCAAAGTCTAGGAATAGTTTACGGAGACATTGGAACCTCGCCATTGTATGTGCTTTCAAGCGTGTTCCCTGACGGTATAAAGAACAACGATGATATCTTGGGCGTTTTCTCCTTAATCTTTTACACACTCACTCTCATTCCTTTTCTCAAGTATGTGTTCGTCGTCCTAAAGGCAACAGATAATGGCGATGGACTTCTTCCGAATAAGCAAGCAGAGGACGCAGAAGTGTCTAATTATCAGCTGAAATTGCCAAACAACCGTGCAAAGAGAGTATCAAAGTTTAAATCTATGCTTGAAAAAAGTAACTTTGTGAAGCTGTTCCTCTTGTTTGCTACTTTGCTCGGCACTTCCATGGTTATCGGTGACGGTGTTCTTACCCCTTGCATATCTGTATTATCCGCCGTGGGAGGGATCAAGGAAGCTGCTAGCAGTATAACTGAAAATCAAATTGTTATGATATCAGTGGTAATATTGATTGGTCTTTTCATGGTTCAGAGATTTGGAACTGATAAAGTAGGTTACAGTTTCGCTCCCATAATCTGTATATGGTTCGCTCTCATTGCTGGGATCGGCGTGTACAACTTCATCAAGCATGATGCATCAGTTATAAAAGCATTAAATCCAAAATACATAGTAGATTATTTCGTCAGGAATAAAATAGAAGCTTGGATTTCTCTCGGTGGCATTGTCCTTTGCACAACAGGAGCTGAAGCATTATTTGCTGATGTTGGACATTTCTCAGTTCGGTCTATACAAATAAGTATGTGTTGTGTTACTTATCCTGCTCTCATTTTGGCGTACGCTGGACAAGCTGCATTTCTTCGCAAAAACAACGATCTTGTTAGTGCCACATTCTATAAGTCCATACCAGGCCCAATGTATTGGCCAATGTTTGTGGTTGCTGTTTTGGCAGCAATAATAGCTTCTCAAGCCATGATCTCAGGGACATTTTCTATAATCCAACAATCTCTATCATTGGGATGTTTTCCTCGCGTGCAAATTGTCCATACATCAGAAAAGTATGAAGGACAAGTTTATATTCCAGAAGTTAATTACATCCTCATGATTGCTTGTATTGCCATCACTGTTGGTTTTAAAAACACAACAGAAATCGGCAATGCCTATGGGATAGCAGTGGTGTTTGTGATGACACTAACATCTGCTTTTCTCATACTAATCATGATCATGATATGGAACACTCCCATAATACTGATCATCGCCTACGCTCTCATCATTGGTTCCGTGGAGCTTATTTATTTAAGCTCAGTTTTATACAAATTTAATCAAGGAGGTTATCTTCCTCTTGCATTCGCCTTGTTTCTAATGTTCATCATGTTTGTTTGGAATAACGTGTATCGGAAGAAATACTACTACGAACTCGACCAAAAGGTTTCTCAAGATAAACTCAGAGAGATTGCTTGTGACACAAGTTTAAGTCGATTACCTGGTCTTGGAATGTTTTACTCAGAGCTTGTTCAAGGCATTCCACCAATTTTCAAGCATTTTGTTGCGAATGTACCTGCACTTCACTCTGTCCTTGTCTTTGTTTCAATCAAATCTTTGCCTGTAAGTAAAGTCCAAAGAGAAGAAAGGTTTCTCTTTCGCCGAGTACAGCCTAAAGAGCTCAATGTATTCCGATGCGTAGTTAGATATGGATACACTGATGTCCGCAACGAGAAAGAGCCTTTTGAGAAGCTAATGCTTGAGAGGTTAAGGGAGTTTATTGTTAATGGATATTATTGTTCTCAAGAAATTACTGGCGGTGAAGCTAAAGTACAAGAGGCAGCTGAGAAAGAGATTGAAGTAATTGAACAAGCAGCAAAGGCTGGTATTGTTCACTTGATTGGTGAAAATGAGGTGATTGCTAGGAAAGGAGCCGGCATATGGAGGAGGTTTATGATTGATTATTCTTACAATTTTTTGAAGAAAAACTTGAGGGAGAGCGAAAGAATATTTGATATTCCTCAACAACGTATGGTCAAAGTGGGAATGACTTATGAACTATAA 2169 0.3933 MGLEDEVVVNMDNVEKNHSKKYKRNDSLEMEAGIASHSRDSKDESTALMLQLAFQSLGIVYGDIGTSPLYVLSSVFPDGIKNNDDILGVFSLIFYTLTLIPFLKYVFVVLKATDNGDGLLPNKQAEDAEVSNYQLKLPNNRAKRVSKFKSMLEKSNFVKLFLLFATLLGTSMVIGDGVLTPCISVLSAVGGIKEAASSITENQIVMISVVILIGLFMVQRFGTDKVGYSFAPIICIWFALIAGIGVYNFIKHDASVIKALNPKYIVDYFVRNKIEAWISLGGIVLCTTGAEALFADVGHFSVRSIQISMCCVTYPALILAYAGQAAFLRKNNDLVSATFYKSIPGPMYWPMFVVAVLAAIIASQAMISGTFSIIQQSLSLGCFPRVQIVHTSEKYEGQVYIPEVNYILMIACIAITVGFKNTTEIGNAYGIAVVFVMTLTSAFLILIMIMIWNTPIILIIAYALIIGSVELIYLSSVLYKFNQGGYLPLAFALFLMFIMFVWNNVYRKKYYYELDQKVSQDKLREIACDTSLSRLPGLGMFYSELVQGIPPIFKHFVANVPALHSVLVFVSIKSLPVSKVQREERFLFRRVQPKELNVFRCVVRYGYTDVRNEKEPFEKLMLERLREFIVNGYYCSQEITGGEAKVQEAAEKEIEVIEQAAKAGIVHLIGENEVIARKGAGIWRRFMIDYSYNFLKKNLRESERIFDIPQQRMVKVGMTYEL 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03462 722 Pfam K+ potassium transporter 53 609 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa5g03462 722 NCBIfam potassium uptake protein 52 721 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa5g03462 722 Coils Coil 11 31 - -
Vifa5g03462 722 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 41 721 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03462 Vifa-Chr5 1139580485 1139583289 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03462 10 722 Inorganic Solute Cotransporters AT4G13420 49.611 0.0 782
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03462 K03549 - pop:7491314 1023.85