Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03376 ATGAGTTCCCTTCCACACGTAGTAGAAGACTGCATGGGCTTCCTCAAACTCTATAGCGACGGTTCCGTTCACCGTTCAAACAACTTCAAATTCCATGTTTCTCCTATCCAAGACAACACCGTAATCTTCAAAGATTGTGTCTTCAACAAAAAACTCAATCTCTCTCTTCGTCTCTACAAACCCAACACCAAAAACAAGCTTCCTGTGATTGTATTCCTTCATGGTGGAGGATTCTGTTTCGGCTCACGCACATGGCCTCATATGCATAACTGTTGTGTGCGTCTTGCCACCGGGCTCCAAGCATTGGTGGTTGCGCCGGACTATCGCCTCGCACCGGAGCACCGTCTTCCAGCTGCGATCGATGACGCTGTTGAAGCGGTGAGGTGGATTCAAAGGCAAGGGTTGAGCTTAAAAGAGGAGGGAAGTAATTGTGGAGAGGCGTGGCTGAGAGATGACGTTGACTTTGACCGTGTCTTTATAGTCGGTGACTCTTCTGGCGGGAACATTGCGCATCAGCTTGCAGTTCGGTTTGGTTCAGACCCAACCGTTATTGAACCGGTTCAGATAAGAGGTTATGTTCTGTTGGCGCCGTTTTTTGGCGGAGAGGTAAGAACCAAGTCTGAAGAAGGTCCTGCAGAACAAACGTTGAATCTTGACTTACTTGATAGATTTTGGAGGCTATCTATGCCTATTGGAGAGACTAGTAGAGATAATCCACTGGCTAATCCATTTGCACCTAATAGTCCAAATCTTGAGAAAATAAAGCTTGATCCTATTTTGGTGATAGTTGGTGGAAATGAATTGCTTAAAGATAGGGCTGCAAACTATTCAACGAGATTGAAAGGAATTGGAAAAGACATTAAATACATTGAATTTGAAGGGTGTGAACATGGTTTTTTCACACATGATTCATATTCAGAAGTTGCAAAAAAAGTTATACATATCCTTAAACGATTCATGCTCGAATCATCTACTTAG 978 0.4376 MSSLPHVVEDCMGFLKLYSDGSVHRSNNFKFHVSPIQDNTVIFKDCVFNKKLNLSLRLYKPNTKNKLPVIVFLHGGGFCFGSRTWPHMHNCCVRLATGLQALVVAPDYRLAPEHRLPAAIDDAVEAVRWIQRQGLSLKEEGSNCGEAWLRDDVDFDRVFIVGDSSGGNIAHQLAVRFGSDPTVIEPVQIRGYVLLAPFFGGEVRTKSEEGPAEQTLNLDLLDRFWRLSMPIGETSRDNPLANPFAPNSPNLEKIKLDPILVIVGGNELLKDRAANYSTRLKGIGKDIKYIEFEGCEHGFFTHDSYSEVAKKVIHILKRFMLESST 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03376 325 SUPERFAMILY alpha/beta-Hydrolases 3 320 IPR029058 -
Vifa5g03376 325 Pfam alpha/beta hydrolase fold 70 300 IPR013094 GO:0016787
Vifa5g03376 325 Gene3D alpha/beta hydrolase 14 324 IPR029058 -
Vifa5g03376 325 PANTHER ARYLACETAMIDE DEACETYLASE 11 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03376 Vifa-Chr5 1112849169 1112850592 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03376 7 314 Carbohydrate Esterase AT5G16080 35.000 1.02e-52 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03376 - - gmx:100803077 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03376 5 1112849169 1112850592 Vifa5g03376 5 1112849169 1112850592 ECH