Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03373 ATGGTGAAAGGACGTCAAGGCGAGCGTGTTAGGCTTTATGTGAGGGGCACAATTCTTGGATACAAGAGATCCAAATCAAACCAGTACCCAAACACATCTCTGGTCCAAATCGAAGGAGTTAACACCAAGGAGGAGGTAGCTTGGTTACAAGGCCACACGGAAACAGTGGTATTGTTCGTGCCAAATTCACATCAAATCTTCCTCCCAAATCAATGGGATCAAGGATTAGAGTATTTATGTATCCCAGTAACATCTGAGATGCAGGTGATATGGCCAGTAGATTTGTGGGTGATTTCTAGCCTCTGA 306 0.4444 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTKEEVAWLQGHTETVVLFVPNSHQIFLPNQWDQGLEYLCIPVTSEMQVIWPVDLWVISSL 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03373 101 Pfam Ribosomal protein L35Ae 12 57 IPR001780 GO:0003735|GO:0005840|GO:0006412
Vifa5g03373 101 SUPERFAMILY Translation proteins 12 53 IPR009000 -
Vifa5g03373 101 Gene3D translation elongation factor selb, chain A, domain 4 2 92 IPR038661 -
Vifa5g03373 101 PANTHER 60S RIBOSOMAL PROTEIN L35A 2 55 IPR001780 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03373 Vifa-Chr5 1111216805 1111217995 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03373 1 81 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 62.963 7.05e-29 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03373 K02917 - aew:130763395 103.219