Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa5g03352 | ATGGGAAACAACTGTGTTGGATCCAGAAAAGCCTCCAAAGATCAATTCGTTTTTCCATCTATTAACCTTCTTCCAGCTTCATGGTCATGGTCACACACTGTTCAACAACACCCACCACCTGTTTGTCAAATTGATTCACAACCAGTTATTATCTTCAAGGAACAACATCCTAGACCAACCAATCCAAAACCGATGATGATGTTGCCTAATATTAAGAGGGTCCGACCAAAAAGTGCTGGACTTAAAGCAGAATCAGTTTTGCTAACAAACTCTGGTTCTTTTAGTGAGTATTATGAGATGGGAGATGAGCTTGGGAAAGGACAATATGGTGTAACTTCGCTTTGTTTCGAGAAAGCGACCCGGAAAAAATATGCATGCAAGTGTATTCCTAAGGTGAAATTGGTGAAAGAAGATGATTTGGAGGATGTGAGGAGGGAGATTCAGATAATGCATCATTTGGTTGGGAGTTCTAATGTGGTGTCTATTAAAGGAGCTTATGAGGATTCTGTTCTTGTTTATATTGTCATGGAGTTATGTGAAGGGGGTGAGTTGTTTGATAGGATTGTTCAAAGGGATCATTATACTGAAAGAAAAGCAGCTAAACTTGCTAGGACTATTGTTAGTATAGTTGAGTCTTGCCACTCACTTGGAGTAATGCATCGTGATCTTAAACCGGAGAATTTTCTTTTCGTTGATGGAGATGAAGATTCAACTCTTAAGGCAATTGATTTTGGAATGTCTGTTTTCCTCAAACCAGGAGAAAAGTTTAGTGATGTAGTAGGAAGTGCTTATTATATTGCACCCGAGATTCTCAGACAGAGTTATGGTCCAGAAGCTGATGTCTGGAGTGCTGGTGTGATCATATACCTTCTCCTATGTGGAACAGCTCCCTTTTATGGTGAATTAGAAACAGAGATATTTCATGAGATTTTGCATGGTGAACTTGATTTCTTTTCGGATCCTTGGCCAAGTATCTCGGAAAGTGCAAAAGACTTGGTTAAGAAGATGCTTGTTAGAGATCCTAGTAAAAGGATAACAGCACATGAAGTTCTTTGCCACCCTTGGATTCAGATTGATGGAGTTGCTCCAGACAAGCCGCTTGATTCCGCAGTTTTGAGTCGTCTAAAGCAATTTTCTGCTATGAACAAGCTCAAGAAAATGGCTCTTAGAGTTATTGCTGAGAATCTCTCTGAAGAAGAAATTTCTGGGTTGAAAGAATTATTTAAGATGATAGACACTGACAACACCGGTCAAATTACTTTTGAAAAACTCAAGGCTGGACTGAAAATGTTCGGCGCAAATCTCAATGAATTTGAGATTTTTGATCTATTGAATGCTGCAGATGTAGATAATAGTGGCACAATTGACTATGGAGAATTCATAGCTGCAACATTGCATTTGAACAAAGTTGGTAGGGAAGATAATTTAGTTACAGCTTTTTCATATTTTGATAAAGACGGAAGTGGCTACATCACTCAAGATGAGATTCAAAAGGTTTGTAAAGAATTTGGCATGGAAGATGTCCACTTAGAGGAAATGATCCAAGAAGCTGATCAAAATAATGATGGACAAATAGACTACAGCGAATTCGTTGCTATGATGCTGAGAGGCAATGCAGATTTAGGCAATAGTGGTTCTAAGTGTAGAAGCACTAGCTTTAACATTGGATTAAGAAAGATAGAGGCACAAACAGTATGTTAA | 1701 | 0.3857 | MGNNCVGSRKASKDQFVFPSINLLPASWSWSHTVQQHPPPVCQIDSQPVIIFKEQHPRPTNPKPMMMLPNIKRVRPKSAGLKAESVLLTNSGSFSEYYEMGDELGKGQYGVTSLCFEKATRKKYACKCIPKVKLVKEDDLEDVRREIQIMHHLVGSSNVVSIKGAYEDSVLVYIVMELCEGGELFDRIVQRDHYTERKAAKLARTIVSIVESCHSLGVMHRDLKPENFLFVDGDEDSTLKAIDFGMSVFLKPGEKFSDVVGSAYYIAPEILRQSYGPEADVWSAGVIIYLLLCGTAPFYGELETEIFHEILHGELDFFSDPWPSISESAKDLVKKMLVRDPSKRITAHEVLCHPWIQIDGVAPDKPLDSAVLSRLKQFSAMNKLKKMALRVIAENLSEEEISGLKELFKMIDTDNTGQITFEKLKAGLKMFGANLNEFEIFDLLNAADVDNSGTIDYGEFIAATLHLNKVGREDNLVTAFSYFDKDGSGYITQDEIQKVCKEFGMEDVHLEEMIQEADQNNDGQIDYSEFVAMMLRGNADLGNSGSKCRSTSFNIGLRKIEAQTVC | 566 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa5g03352 | 566 | CDD | STKc_CAMK | 98 | 355 | - | - | |
Vifa5g03352 | 566 | Gene3D | Phosphorylase Kinase; domain 1 | 100 | 183 | - | - | |
Vifa5g03352 | 566 | ProSitePatterns | EF-hand calcium-binding domain. | 448 | 460 | IPR018247 | - | |
Vifa5g03352 | 566 | FunFam | calcium-dependent protein kinase 1 | 184 | 363 | - | - | |
Vifa5g03352 | 566 | Pfam | EF-hand domain pair | 416 | 466 | IPR002048 | GO:0005509 | |
Vifa5g03352 | 566 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 435 | 470 | IPR002048 | GO:0005509 | |
Vifa5g03352 | 566 | ProSitePatterns | Protein kinases ATP-binding region signature. | 104 | 127 | IPR017441 | GO:0005524 | |
Vifa5g03352 | 566 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 88 | 530 | - | - | |
Vifa5g03352 | 566 | CDD | EFh | 479 | 534 | IPR002048 | GO:0005509 | |
Vifa5g03352 | 566 | SUPERFAMILY | EF-hand | 395 | 536 | IPR011992 | - | |
Vifa5g03352 | 566 | Pfam | EF-hand domain pair | 475 | 534 | IPR002048 | GO:0005509 | |
Vifa5g03352 | 566 | SMART | efh_1 | 439 | 467 | IPR002048 | GO:0005509 | |
Vifa5g03352 | 566 | SMART | efh_1 | 475 | 503 | IPR002048 | GO:0005509 | |
Vifa5g03352 | 566 | SMART | efh_1 | 509 | 537 | IPR002048 | GO:0005509 | |
Vifa5g03352 | 566 | SMART | efh_1 | 403 | 431 | IPR002048 | GO:0005509 | |
Vifa5g03352 | 566 | ProSitePatterns | EF-hand calcium-binding domain. | 518 | 530 | IPR018247 | - | |
Vifa5g03352 | 566 | FunFam | Calcium-dependent protein kinase 1 | 364 | 538 | - | - | |
Vifa5g03352 | 566 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 218 | 230 | IPR008271 | GO:0004672|GO:0006468 | |
Vifa5g03352 | 566 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 509 | 540 | IPR002048 | GO:0005509 | |
Vifa5g03352 | 566 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 399 | 434 | IPR002048 | GO:0005509 | |
Vifa5g03352 | 566 | Gene3D | - | 364 | 537 | - | - | |
Vifa5g03352 | 566 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 471 | 506 | IPR002048 | GO:0005509 | |
Vifa5g03352 | 566 | ProSitePatterns | EF-hand calcium-binding domain. | 484 | 496 | IPR018247 | - | |
Vifa5g03352 | 566 | ProSiteProfiles | Protein kinase domain profile. | 98 | 356 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa5g03352 | 566 | Gene3D | Transferase(Phosphotransferase) domain 1 | 184 | 363 | - | - | |
Vifa5g03352 | 566 | SMART | serkin_6 | 98 | 356 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa5g03352 | 566 | SUPERFAMILY | Protein kinase-like (PK-like) | 96 | 357 | IPR011009 | - | |
Vifa5g03352 | 566 | FunFam | Calcium-dependent protein kinase 1 | 100 | 183 | - | - | |
Vifa5g03352 | 566 | Pfam | Protein kinase domain | 98 | 356 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa5g03352 | Vifa-Chr5 | 1105799934 | 1105802573 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa5g03352 | 54 | 538 | EF-hand Containing Proteins | AT3G10660 | 69.691 | 0.0 | 724 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Vifa5g03352 | Pkinase | 3.4e-71 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa5g03352 | K13412 | - | gmx:100814475 | 788.875 |