Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa5g03322 | ATGCCGAGCTTCGCAACGAGGTTTAAAGCTGCAATAAAAAAGATGGATATGCAAGCATCAAAAGAATTCCTAGCCGAACTAAAGGTTCTGACACACGTTCATCACTTGAATTTGGTGCGGCTAATTGGATATTGTGTTGAGGGCTCCTTATTTTTGGTTTATGAATACAGTGAGAATGGAAATCTAAGTCAACATTTGCGCGGCACAGGGAAGGATCCATTATCATGGGCAGCTAGAGTTCAAATTGCATTAGACTCAGCAAGAGGACTTGAATACATTCACGAGCATACAGTTCCTGTCTATATACATAGAGATGTTAAATCAGCAAACATTTTGATAGACAAAAACTTCCGCGGAAAGGTTGCGGATTTTGGTTTGACAAAATTGACTGAATATGGTAGCTCCTCGTTACAAACACGCCTTGTCGGGACGTTTGGATATATGCCTCCTGAGTAA | 456 | 0.4079 | MPSFATRFKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYSENGNLSQHLRGTGKDPLSWAARVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNFRGKVADFGLTKLTEYGSSSLQTRLVGTFGYMPPE | 151 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa5g03322 | 151 | Pfam | Protein tyrosine and serine/threonine kinase | 7 | 151 | IPR001245 | GO:0004672|GO:0006468 | |
Vifa5g03322 | 151 | ProSiteProfiles | Protein kinase domain profile. | 1 | 151 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa5g03322 | 151 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 101 | 113 | IPR008271 | GO:0004672|GO:0006468 | |
Vifa5g03322 | 151 | Gene3D | Transferase(Phosphotransferase) domain 1 | 3 | 151 | - | - | |
Vifa5g03322 | 151 | SUPERFAMILY | Protein kinase-like (PK-like) | 7 | 151 | IPR011009 | - | |
Vifa5g03322 | 151 | SMART | serkin_6 | 6 | 151 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa5g03322 | 151 | PANTHER | CHITIN ELICITOR RECEPTOR KINASE 1-RELATED | 9 | 151 | IPR044812 | GO:0019199|GO:0045087 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa5g03322 | Vifa-Chr5 | 1097281187 | 1097282186 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa5g03322 | 9 | 151 | Receptor kinase-like Gene Family | AT3G21630 | 80.420 | 2.27e-79 | 244 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LysM | Vifa5g03322 | PK_Tyr_Ser-Thr | 3.6e-30 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa5g03322 | - | K13429 | gmx:100802308 | 273.478 |