Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03318 ATGGAACCTACTGATAAAGAAGAGAAGATTGTGTTTGTAATTGACGACCGATCGACTAGCGATGTTGTGGTGAGGCTACGGACGCAAGAAGGTCGAGAAGAATGGATGTACTGTCACTCGGTGATTCTTGTTAAGAGTTGCAAGTATTTTGCTGACAGGCTGTCTGAGAATTGGCCGACTTGTCAGATACTAGGTTCGCGTAATTGTGTTGATGTTAATTGCCAAGAATCGGATTTTGATTACTATGTAAATGTGATTAGATTTCTGTACATTGTCGATGATGATGGTTTGGTTGATGATTTGTGGCATGGTGTGAGAAATAATCTTGGGATTTTGCAAGTGGCGGTTGAGCTTGATTGCCCGAAAATTGTTGCTGCGTGTGTGAGTTACTTGGAAGCAATGACGTGGGAAGAGAGTGAAGAGGAGGAGATATTGAAGATTGTACCGAGGATGGGATTGCAAGCAGAGCCGATCCTAGCTAGACTTCAACCGGTTGATGAGATAGCTGTTAGGAACGTGTTTCTTTCGGCGTTACGGTTTGTTACGTCGTCCCCTCCACTGGCAATGAATGATCTGAAATCTTCAGCGCAAGAGCAACTTGATTACATGCTAAGTGAGGATGATGATGTCCCTTTGTTGATCGCTGATGACAAGATAAAACTTGAGAATCGCATTCTGAAGCAGGGAATGTCTCGTTGTTTCGATCCTATTTGA 714 0.4328 MEPTDKEEKIVFVIDDRSTSDVVVRLRTQEGREEWMYCHSVILVKSCKYFADRLSENWPTCQILGSRNCVDVNCQESDFDYYVNVIRFLYIVDDDGLVDDLWHGVRNNLGILQVAVELDCPKIVAACVSYLEAMTWEESEEEEILKIVPRMGLQAEPILARLQPVDEIAVRNVFLSALRFVTSSPPLAMNDLKSSAQEQLDYMLSEDDDVPLLIADDKIKLENRILKQGMSRCFDPI 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03318 237 Gene3D Potassium Channel Kv1.1; Chain A 8 154 IPR011333 -
Vifa5g03318 237 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 14 233 IPR038920 -
Vifa5g03318 237 SUPERFAMILY POZ domain 14 132 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03318 Vifa-Chr5 1095800660 1095801667 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Vifa5g03318 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03318 - - gmx:100810370 356.295