Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03295 ATGGCAGATAACAAGCAACCACAATTGAACGGTGCATACTACGGCCCCGCCATTCCACCACCACCACCACAACCCCGTCCACACCACCAACGAAGCAGAAGCTGTTGTTGCTGTCTCTTCAGTTTCTTCTGGAAGCTCCTTGTCACACTCATCGTTCTTGCTGGTCTCGCTGTCCTTATCTTCTATCTCGTTGTCCATCCCCGCCCCTTCAAATTCTATGTAACAGAAACCAATCTAACTGAATTCGACAACAAAAACAACACACTACACTACAACATGGTTCTCAATTTCACAGCACGTAACCCAAACAAAAAACTCAGCATCTATTACGACAAAGTTGAGGCTCTAGCATTCTACGAAGGGGAGAGGCTTACTAATAATGTTGATGTGATCACACACATGAACTCATTTCGTCAATATAAGAAGAGCAGTGACCCAATGAGCGTTGTTTTCTCAGGACAAAAACTAATGTTGCTCGACAACGATCAAGTCTCAGAGTTCAACAAAGATAAGAGTGTTGAGGTTTATGATATCTATGTGAAACTCTACTTCAGGGTTAGGTTCAGACTTGGAGATTTGATATCTGGTCATTACAAGCCTAAGGTGAAATGTGATCTGAAAGTCCCTTTGAATTCTAATAAGACCACAGCAACGTTTGTGCCATCCAAGTGCCATGTTGATTTCTACTGA 690 0.4275 MADNKQPQLNGAYYGPAIPPPPPQPRPHHQRSRSCCCCLFSFFWKLLVTLIVLAGLAVLIFYLVVHPRPFKFYVTETNLTEFDNKNNTLHYNMVLNFTARNPNKKLSIYYDKVEALAFYEGERLTNNVDVITHMNSFRQYKKSSDPMSVVFSGQKLMLLDNDQVSEFNKDKSVEVYDIYVKLYFRVRFRLGDLISGHYKPKVKCDLKVPLNSNKTTATFVPSKCHVDFY 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03295 229 PANTHER OS05G0367900 PROTEIN 33 215 IPR044839 GO:0098542
Vifa5g03295 229 Pfam Late embryogenesis abundant protein 97 204 IPR004864 -
Vifa5g03295 229 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03295 Vifa-Chr5 1088492830 1088493519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03295 64 218 SNARE and Associated Proteins AT1G32270 33.333 1.88e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03295 - - gmx:100795302 291.967