Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03294 ATGTACGAGAAACAGCAACTCAACGGAGCCTACTACGGCCCCTCAATCCCCCCACAAAGAACCCACCACCGCCCCTCCCGCGGCGGCGGTTTCGACTGCTGCTGCGGTTGTCTCTTCAACCTCATCTTCAAACTAATCCTCACCGTCATAATCATAATCGGAATCGCCATCTTCCTCTTCTGGCTCATAGTTCGTCCCAACGTAGTCAAAGTCCACGTCACCAACGCTTCCCTCACGCAATTCAACTACACCACCAACAACAACAACCTCAACTACGATCTCTCTCTCAACCTAACAATCCGCAACCCGAACAAACGACTTGGTATCTACTACGATTACATCGAAGCTAGAGCTTTGTACCATGATGCTAGAGTTGAATCGGTTTTTCTTGATCCTTTTTATCAAGGACACAAAACAACTAACTTTCTTAACACTTCGTTTAAGGGTTCGAAAGTGATGGTTCTTGATGGTGATCAGAGTTTGGATTTTAACAAAGAGAAGGCTTCTAAGGTTTATGAGATTGATCTGAAGATTTATCTTAGGATTAGGTTTAAGCTTGGAGTGCTTAAGACCAGGACGATTAAGCCTAAGGTTACTTGTGAGTTGCGTGTTCCTTTGAACTCTGGCGGTGGTGCTACGACGGTAGACGGTGGGTTTCAGACCACCAAGTGTGACTGGGATCGTTGA 687 0.4614 MYEKQQLNGAYYGPSIPPQRTHHRPSRGGGFDCCCGCLFNLIFKLILTVIIIIGIAIFLFWLIVRPNVVKVHVTNASLTQFNYTTNNNNLNYDLSLNLTIRNPNKRLGIYYDYIEARALYHDARVESVFLDPFYQGHKTTNFLNTSFKGSKVMVLDGDQSLDFNKEKASKVYEIDLKIYLRIRFKLGVLKTRTIKPKVTCELRVPLNSGGGATTVDGGFQTTKCDWDR 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03294 228 PANTHER OS05G0367900 PROTEIN 33 207 IPR044839 GO:0098542
Vifa5g03294 228 MobiDBLite consensus disorder prediction 1 23 - -
Vifa5g03294 228 Pfam Late embryogenesis abundant protein 97 200 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03294 Vifa-Chr5 1088141448 1088142134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03294 63 220 SNARE and Associated Proteins AT1G32270 39.241 3.11e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03294 - - gmx:100793187 292.352