Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03286 ATGTCTAGCTCCAGGAAGAAGGTTCTCCTGAACACAGTGTCTGTCAAACTAGGCTGTGGAAGCTGCAGAAGACTGAAGCTAAGCAACATTTTCAACCCAAAACCAAAACCCAAAAACCCCACTTACCAAAAACACAAACTTTACAACAACCACTACTCTACTTCCTCCTCAGGTCCTTGGAATGAAGACAAATACGACACTACAAGCACCACCAACACCACCAACACCAACACTGCCACCACATTTTCACCTCTCTACTCATCAAACCTTTCTGACTCTGAAACCTACGCAAAGGACCAGAGAAGAGTAGGAGGCTTAGGAAGAGGTGGAGGAGGAGAAGGTGTGGCTGTTGAGAAAGACTCTGAAGACCCTTATCTTGACTTCAGACACTCCATGCTTCAAATGATATTGGAGAATGAAATATACTCTAAGGATGATCTTAGAGAGCTTCTCAACTGTTTTCTTCAGCTGAATGCACCTTATCACCATGGTGTTATTGTTAGAGCTTTTACTGAGATTTGGAACGGTGTTTCTGATAAGAGGGCTCATACCAACCGTACCCGTAAGCCACGTGAATATTAA 582 0.4364 MSSSRKKVLLNTVSVKLGCGSCRRLKLSNIFNPKPKPKNPTYQKHKLYNNHYSTSSSGPWNEDKYDTTSTTNTTNTNTATTFSPLYSSNLSDSETYAKDQRRVGGLGRGGGGEGVAVEKDSEDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQLNAPYHHGVIVRAFTEIWNGVSDKRAHTNRTRKPREY 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03286 193 MobiDBLite consensus disorder prediction 53 84 - -
Vifa5g03286 193 ProSiteProfiles OVATE domain profile. 117 176 IPR006458 -
Vifa5g03286 193 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 52 179 IPR038933 GO:0045892
Vifa5g03286 193 NCBIfam uncharacterized plant-specific domain TIGR01568 115 175 IPR006458 -
Vifa5g03286 193 Pfam Transcriptional repressor, ovate 121 176 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03286 Vifa-Chr5 1085090132 1085090713 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vifa5g03286 Ovate 1.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03286 - - mtr:25499452 295.049