Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03282 ATGATGAAGAAAAAAACATTGAACCTCTCTTCTCTTCTCAAAAACACAGACCTCAAATATTCATCTCCATGGCCATGGCCTTATTGTCACCAACCAAAAACACTTTCTTTCAGAGGTGAAAATAATAACCAAGATGACATTAACAACACATTCAAAATCATCAACTCAGCTTACTTGGAGCCTTCTGAATCTCTTTCTCCAAAAGCTTCTTCTCTTGATGACTCAGGAAAAACCGACTCGACGGAACCCGTTATTCGCGGGTTACCGTCTGATCGGTTTTTCTTCGAGCCGGACGAGACCAACTCCATTTTAGATGCTAATAATAAAGCCGTTATGCATAGTGAAAGTGAAGCTACTCAGAGTTTACCATTCAAAGATAGTGTTGTGTTATCCATGGAATCTCAAGATCCTTATCTGGATTTTCGAAAGTCTATGGAGGAAATAGTGGAAGCTCATGATGTCAAAGATTGGGAGTGTCTTCAAGGGCTTTTGTGTTGGTATTTGAAGGTTAACGAGAAGAACAACCATGGCTATATCGTTGGTGCTTTTGTTGATTTATTGGTTGGTCTTGCATTTACTTCGACTTCGTCTTCGTTTTCTTCTTCCTCTTCTTCATCTTCTCGTTCTCCTTTTTCTCCTTTATCGTTTTATAGTTCTTCTTTGTCTTCCTCTTATTGCACTCGGTGTGCTTCGTGTTCTGCGCCTCGCGAAGAAGAGGTTGATACTCCTTGTTCTTCCTTGTTGTTAGAACAAGTTAGGGAGGAGAGTGATGATGGCGAAGATAAACTACTAGAAGCTTCAACTTCATTTTCGTCATCATCAACTAGTCATTGA 834 0.3993 MMKKKTLNLSSLLKNTDLKYSSPWPWPYCHQPKTLSFRGENNNQDDINNTFKIINSAYLEPSESLSPKASSLDDSGKTDSTEPVIRGLPSDRFFFEPDETNSILDANNKAVMHSESEATQSLPFKDSVVLSMESQDPYLDFRKSMEEIVEAHDVKDWECLQGLLCWYLKVNEKNNHGYIVGAFVDLLVGLAFTSTSSSFSSSSSSSSRSPFSPLSFYSSSLSSSYCTRCASCSAPREEEVDTPCSSLLLEQVREESDDGEDKLLEASTSFSSSSTSH 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03282 277 MobiDBLite consensus disorder prediction 63 78 - -
Vifa5g03282 277 MobiDBLite consensus disorder prediction 253 277 - -
Vifa5g03282 277 NCBIfam uncharacterized plant-specific domain TIGR01568 128 191 IPR006458 -
Vifa5g03282 277 ProSiteProfiles OVATE domain profile. 130 189 IPR006458 -
Vifa5g03282 277 MobiDBLite consensus disorder prediction 63 84 - -
Vifa5g03282 277 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 62 190 IPR038933 GO:0045892
Vifa5g03282 277 Pfam Transcriptional repressor, ovate 134 190 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03282 Vifa-Chr5 1083470641 1083471474 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vifa5g03282 Ovate 2.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03282 - - psat:127125591 390.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03282 5 1083470641 1083471474 Vifa3g03638 3 1063178588 1063179310 ECH
Vifa5g03282 5 1083470641 1083471474 Vifa5g03282 5 1083470641 1083471474 ECH