Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa5g03282 | ATGATGAAGAAAAAAACATTGAACCTCTCTTCTCTTCTCAAAAACACAGACCTCAAATATTCATCTCCATGGCCATGGCCTTATTGTCACCAACCAAAAACACTTTCTTTCAGAGGTGAAAATAATAACCAAGATGACATTAACAACACATTCAAAATCATCAACTCAGCTTACTTGGAGCCTTCTGAATCTCTTTCTCCAAAAGCTTCTTCTCTTGATGACTCAGGAAAAACCGACTCGACGGAACCCGTTATTCGCGGGTTACCGTCTGATCGGTTTTTCTTCGAGCCGGACGAGACCAACTCCATTTTAGATGCTAATAATAAAGCCGTTATGCATAGTGAAAGTGAAGCTACTCAGAGTTTACCATTCAAAGATAGTGTTGTGTTATCCATGGAATCTCAAGATCCTTATCTGGATTTTCGAAAGTCTATGGAGGAAATAGTGGAAGCTCATGATGTCAAAGATTGGGAGTGTCTTCAAGGGCTTTTGTGTTGGTATTTGAAGGTTAACGAGAAGAACAACCATGGCTATATCGTTGGTGCTTTTGTTGATTTATTGGTTGGTCTTGCATTTACTTCGACTTCGTCTTCGTTTTCTTCTTCCTCTTCTTCATCTTCTCGTTCTCCTTTTTCTCCTTTATCGTTTTATAGTTCTTCTTTGTCTTCCTCTTATTGCACTCGGTGTGCTTCGTGTTCTGCGCCTCGCGAAGAAGAGGTTGATACTCCTTGTTCTTCCTTGTTGTTAGAACAAGTTAGGGAGGAGAGTGATGATGGCGAAGATAAACTACTAGAAGCTTCAACTTCATTTTCGTCATCATCAACTAGTCATTGA | 834 | 0.3993 | MMKKKTLNLSSLLKNTDLKYSSPWPWPYCHQPKTLSFRGENNNQDDINNTFKIINSAYLEPSESLSPKASSLDDSGKTDSTEPVIRGLPSDRFFFEPDETNSILDANNKAVMHSESEATQSLPFKDSVVLSMESQDPYLDFRKSMEEIVEAHDVKDWECLQGLLCWYLKVNEKNNHGYIVGAFVDLLVGLAFTSTSSSFSSSSSSSSRSPFSPLSFYSSSLSSSYCTRCASCSAPREEEVDTPCSSLLLEQVREESDDGEDKLLEASTSFSSSSTSH | 277 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa5g03282 | 277 | MobiDBLite | consensus disorder prediction | 63 | 78 | - | - | |
Vifa5g03282 | 277 | MobiDBLite | consensus disorder prediction | 253 | 277 | - | - | |
Vifa5g03282 | 277 | NCBIfam | uncharacterized plant-specific domain TIGR01568 | 128 | 191 | IPR006458 | - | |
Vifa5g03282 | 277 | ProSiteProfiles | OVATE domain profile. | 130 | 189 | IPR006458 | - | |
Vifa5g03282 | 277 | MobiDBLite | consensus disorder prediction | 63 | 84 | - | - | |
Vifa5g03282 | 277 | PANTHER | TRANSCRIPTION REPRESSOR OFP7-RELATED | 62 | 190 | IPR038933 | GO:0045892 | |
Vifa5g03282 | 277 | Pfam | Transcriptional repressor, ovate | 134 | 190 | IPR006458 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa5g03282 | Vifa-Chr5 | 1083470641 | 1083471474 | Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | OFP | Vifa5g03282 | Ovate | 2.3e-22 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa5g03282 | - | - | psat:127125591 | 390.578 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vifa5g03282 | 5 | 1083470641 | 1083471474 | Vifa3g03638 | 3 | 1063178588 | 1063179310 | ECH | |
Vifa5g03282 | 5 | 1083470641 | 1083471474 | Vifa5g03282 | 5 | 1083470641 | 1083471474 | ECH |