Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03273 ATGACTGCATCCAAGAAAAATCACAAAGACAAACCAGTTCGCCGCAAGGAAGAAAAACCGGAAGAACCAGAATTGCCGAAATACAGAGATCGAGCTAAGGAACGTAGAGAAGATCAAAATCCGGATTATGAACAAACTGAACTTGGGTTTCATGTTGTTGCTCCTCCTGGTACCGTTGATATTACGTCATCTGATGCGTATAAGTTATCGATTGAGAAGAGCAAGTACCTTGGAGGTGATGTGGAGCATACATATTTGGTTAAAGGTTTAGATTATGCTTTACTGAACAAAGTAAGGAGTGAAATTAAGAAGCCAGATCTGAGGAAAAAGGTTTTGCCTGCTGTCATCGTTCGTCAACGTAAGCCATGGCGCCGAAAGGACGGTGTCTTCAAGTACTTTGAAGATAACGCTGGTGTCATTGTGAATCCTAAGGGAGAAATGAAAGGTTCTGCTATTACTGGTCCTATTGGTAAGGAGTGTGCTGATCTATGGCCTAGAATCGCAAGTGCTGCCAATGCCATTGTTTGA 528 0.4242 MTASKKNHKDKPVRRKEEKPEEPELPKYRDRAKERREDQNPDYEQTELGFHVVAPPGTVDITSSDAYKLSIEKSKYLGGDVEHTYLVKGLDYALLNKVRSEIKKPDLRKKVLPAVIVRQRKPWRRKDGVFKYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03273 175 MobiDBLite consensus disorder prediction 1 47 - -
Vifa5g03273 175 SUPERFAMILY Ribosomal protein L14 104 175 IPR036853 GO:0003735|GO:0005840|GO:0006412
Vifa5g03273 175 ProSitePatterns Ribosomal protein L14 signature. 114 140 IPR019972 -
Vifa5g03273 175 SMART Ribosomal_L14_2 79 175 IPR000218 GO:0003735|GO:0005840|GO:0006412
Vifa5g03273 175 PANTHER RED PROTEIN IK FACTOR CYTOKINE IK 5 104 IPR039896 -
Vifa5g03273 175 MobiDBLite consensus disorder prediction 1 44 - -
Vifa5g03273 175 Pfam RED-like protein N-terminal region 5 106 IPR012916 -
Vifa5g03273 175 Gene3D Ribosomal protein L14 82 175 IPR036853 GO:0003735|GO:0005840|GO:0006412
Vifa5g03273 175 Pfam Ribosomal protein L14p/L23e 98 175 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03273 Vifa-Chr5 1080414318 1080414845 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03273 32 175 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 58.904 5.85e-48 151