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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vifa5g03263
ATGTCTATACAAGAAACGACTTCGTTATGGTGGACTACTCACCAACATCAACAACAAAGACAAGAGAAGACGAAGAGTCATCAACAAGAAGAAGAAGGTGAGTTAGAAGACGACGTCGTTTTAGAGTCAATGATGAAACTGAAAACGGCTTCAACGTCGGTGTCCGCGTCGGTGTCGGTATTGGAAGAAGAGAAAGAAGCTATGTTTGAGAAACCGTTAACACCAAGCGACGTTGGGAAGCTGAACCGTCTCGTGATACCGAAGCAACACGCGGAGAGATATTTCCCACTCGACTCAGAGGAAACGAAGGGACTTCTACTGAGTTTCGACGACGAGTCAGGGAAGTGTTGGAGGTTCCGTTATTCGTACTGGAACAGTAGCCAGAGTTACGTTCTTACCAAAGGTTGGAGTCGTTATGTGAAAGATAAACGTCTTGATGCCGGCGACGTCGTTTTGTTTCACAGACACCGTACACATCCTCACCGCTTTTTTATCTCTTGGAGGCGCCGCCATGCTAGTACGGACGGGAATGGTGCTGTTGTTCCTGTTGGGTGGTCCAGAGGGCTCTATCCTGCGCATCATCCTTATCCTACGCATCATCACCCTTTCTCATACCATACCGCAGGCGAAGGGTCCCAAAGTCAGAACACAAACGCACCTTGTGGAAACAATTCGAGTACTTCCAGGGTGCTGAGGCTGTTTGGAGTGAACATGGAATGCCAACCTGATAATAATATTAGTGATTCCGAAGCAGCAGAATGCTCTTATAATATGTCACAAGGATCACAATTCTACCACCACCTCCACCGTCAACCACCGTCAAACACTCACCATCACATGCTACGTCAACAACAACCATAG
861
0.4739
MSIQETTSLWWTTHQHQQQRQEKTKSHQQEEEGELEDDVVLESMMKLKTASTSVSASVSVLEEEKEAMFEKPLTPSDVGKLNRLVIPKQHAERYFPLDSEETKGLLLSFDDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFHRHRTHPHRFFISWRRRHASTDGNGAVVPVGWSRGLYPAHHPYPTHHHPFSYHTAGEGSQSQNTNAPCGNNSSTSRVLRLFGVNMECQPDNNISDSEAAECSYNMSQGSQFYHHLHRQPPSNTHHHMLRQQQP
286
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vifa5g03263
286
PANTHER
B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3
14
251
IPR044800
GO:0003700
Vifa5g03263
286
Gene3D
-
63
177
IPR015300
-
Vifa5g03263
286
SMART
B3_2
69
171
IPR003340
GO:0003677
Vifa5g03263
286
MobiDBLite
consensus disorder prediction
1
17
-
-
Vifa5g03263
286
FunFam
B3 domain-containing protein
62
179
-
-
Vifa5g03263
286
ProSiteProfiles
B3 DNA-binding domain profile.
69
171
IPR003340
GO:0003677
Vifa5g03263
286
MobiDBLite
consensus disorder prediction
266
286
-
-
Vifa5g03263
286
Pfam
B3 DNA binding domain
69
170
IPR003340
GO:0003677
Vifa5g03263
286
CDD
B3_DNA
68
158
IPR003340
GO:0003677
Vifa5g03263
286
MobiDBLite
consensus disorder prediction
1
34
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vifa5g03263
Vifa-Chr5
1077808259
1077809506
Dispersed/Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vifa5g03263
62
255
RAV Transcription Factor Family
AT5G06250
49.767
9.04e-67
207
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
B3
Vifa5g03263
B3
4.5e-29
CL0405
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vifa5g03263
K09287
-
gmx:100781153
276.559
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Vifa5g03263
5
1077808259
1077809506
Vifa5g03263
5
1077808259
1077809506
ECH
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