Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03204 ATGGATCTCTCTCCCTTTCTCCTCTCTTTCATTTTCATTATTCTACATCTTTCTGGATCAAGAGTTGTTCAAGGTGAAGTTGATATTCAACATCACCACCTTCATCAAAAAGAAAGTATAACAAAATTGTTTGTGTTTGGAGATTCATATGCTGACACAGGTAACATCAAAAGAGGTTTTGCTCCTTCGTGGAAACATCCTTATGGTGTCACTTTTCCCGGCAAGCCCGCCGGTCGTTTCTCCGATGGTAGAGTCCTCACCGATTACATTGCCAATTATCTGAAGGTGAAATCACCAGCATCATACAGAATAAGGAAACATTTGGCACCACATCATTTGAAAAATGGAATGAGTTTTGCATTTGGTGGTACTGGTGTGTTTGAGACATTGAATCCAGGTCCAAACATGACAACTCAGATCAATTATTTTCAAAAGGCAATCCTAGACAAAGTATTCACAACCTCAGATATTAGAAAATCAGTTGCTCTTGTTTCTGTTGCTGGTAATGACTACACTCGTTACACCATCAAAAATGGCTCTATTCAGGGTTTACCATCATTCATATCATCAGTGGTTAATCAAACAATCACAAACGTAATTCGCATCAAAGAATTAGGAGTCAAAAAAGTGATTATATCAAATCTTCAACCAGTTGGATGTCTACCTTCAGTGACAGCTTCATCTTCATTCAAACAATGCAACGAAACATCGAATAACCTCCTCGTAGCTTACCATAACACGCTCTTAACCGAAGCTGTGACAAAATTGAACCAACAAATCAATGATCATTCTTCATCACCCTTTATAATTCTTGATCTATACAATAGTTTCATGTCGGTGTTGAAGCATCCAAGCACACACAACATTAAGAATGAGTTGGAACCTTGTTGTGTTGGAGTGAGTAGTAAGTATATTTGTGGAAGTATTGTGAAGAAGGTTAAGAAGTATACGGTTTGTGAGAATCCTAAATCGGCTTTCTTTTGGGATTTGGTTCATCCTACGGATGCAGGGTGGCGCGCTGTTTATACCAGGCTAAGAATATCGAATGCTCTTGAACAGATTCATTACTAG 1071 0.3838 MDLSPFLLSFIFIILHLSGSRVVQGEVDIQHHHLHQKESITKLFVFGDSYADTGNIKRGFAPSWKHPYGVTFPGKPAGRFSDGRVLTDYIANYLKVKSPASYRIRKHLAPHHLKNGMSFAFGGTGVFETLNPGPNMTTQINYFQKAILDKVFTTSDIRKSVALVSVAGNDYTRYTIKNGSIQGLPSFISSVVNQTITNVIRIKELGVKKVIISNLQPVGCLPSVTASSSFKQCNETSNNLLVAYHNTLLTEAVTKLNQQINDHSSSPFIILDLYNSFMSVLKHPSTHNIKNELEPCCVGVSSKYICGSIVKKVKKYTVCENPKSAFFWDLVHPTDAGWRAVYTRLRISNALEQIHY 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03204 356 PANTHER OSJNBB0059K02.9 PROTEIN 20 348 - -
Vifa5g03204 356 Gene3D SGNH hydrolase 28 350 IPR036514 -
Vifa5g03204 356 Pfam GDSL-like Lipase/Acylhydrolase 43 341 IPR001087 GO:0016788
Vifa5g03204 356 SUPERFAMILY SGNH hydrolase 42 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03204 Vifa-Chr5 1061112721 1061116428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03204 35 341 Pollen Coat Proteome AT1G75930 27.052 3.36e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03204 - - psat:127128969 600.897