Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03203 ATGGAATCAGAGAAACGCTATGCTTCAGCTTCTTCTTCTCTTACCCCTACTTCTTCATCCTCCTCTTCCTCTCCCTCTCCCTCTCCGTCCGACGAGTTTGAGGCGGCGGAGACTCTAGCTTACTTTGCGCGATTACCAATGCGCCGCCACACCACTCATTCCACCGATAACTCCTGCACCAACCGATTCAACCTCGACTCAACGATTCCTCACTCGGATCCTCCTCCGCCTAGTACGCAAAATGAGTGCTTAAGAAACATCAAGGTGGAGCAGGATGCTGATTTATCCAAGACTGATCACTGCAACAAGACGAGACGTGATTTAACAGAGGAAGAAAAAGAAGCACGGAGGATACGAAGGGTATTGGCAAATAGAGAGTCCGCTAGGCAGACGATTCGCCGCAGGCAGGCTCTGAGTGAGGAGTTAAGCAGAAAAGCTGCCTCGTTAGTGCTGGAAAATGAAAACCTAAAGAGAAAGAAGGAGCTGGCTTTGAAAGAGTATCAGTCTTTAGAGACTACAAATAAGCTCTTAAAAGCACAAGTATCTAAGTCAATAAACACGAAAGTGGAGAAAACTCCTATTGAGCTGGAGTTATCTATGGCGGAGGTAGCACCTATGTCTGGTAATAGTCCATGGTTTCGTTATAACCATTTTCCAGTTAGACAATTATTTTGGCCCTCCATCTTTCAATCTTCTAATCAAGTTCATACACCATTTAACTCCATTGCCATTCCATCACATGTATACGTACCATGTTCTTCTAAGTCTGAATCTCCTCACAAGCAAGATAACCCTATAAATGACAATCAAACACAAAATCCATTGTACATGTTTCCATGTCCTTGGTTATACCCTCCTCCAGATATTGGAAATGGACAGCCATCGGCTTCCAGTTGCGTAGAAGATAAACAAGATAATCTTCCTCTAGATGAACAATGCAGTACTAGTTTATCCTTAAACAGAGCAGGAAATGGGAACTATCATGACACTCTACCTATCAATTTGAAAACAGAACCTACTGAACGGGCCAAATCCAGATCTAGTAGTGACCCTGGTCACACCACTCCGTGTTTTTCTTTGGATGGAATTGAGCAGAAAAAAAGATGTCACAATACAGAAAAGTTCCATAGACCTGCATTTGATGGTAATGGACATGCTTCTGTAGTCAAGCAAGAACCCGAGCTTCAGTTAAATTTGGCTTCCAACACCATGGTATCTTCAACAGCTTCTGGTATCACAGCTTCTTCACTTGAAAAGAAACAAGAACAGTTCATATGCCCAGGAAAAAATCTAGTGGATGCAGTTGCTGCGGCAGAGGCACGAAAGAGGAGAAAGGAACTAACAAAACTAAAAAGTAACCAAAACCGCCGGATGGAGTGTTGA 1383 0.4338 MESEKRYASASSSLTPTSSSSSSSPSPSPSDEFEAAETLAYFARLPMRRHTTHSTDNSCTNRFNLDSTIPHSDPPPPSTQNECLRNIKVEQDADLSKTDHCNKTRRDLTEEEKEARRIRRVLANRESARQTIRRRQALSEELSRKAASLVLENENLKRKKELALKEYQSLETTNKLLKAQVSKSINTKVEKTPIELELSMAEVAPMSGNSPWFRYNHFPVRQLFWPSIFQSSNQVHTPFNSIAIPSHVYVPCSSKSESPHKQDNPINDNQTQNPLYMFPCPWLYPPPDIGNGQPSASSCVEDKQDNLPLDEQCSTSLSLNRAGNGNYHDTLPINLKTEPTERAKSRSSSDPGHTTPCFSLDGIEQKKRCHNTEKFHRPAFDGNGHASVVKQEPELQLNLASNTMVSSTASGITASSLEKKQEQFICPGKNLVDAVAAAEARKRRKELTKLKSNQNRRMEC 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03203 460 MobiDBLite consensus disorder prediction 1 37 - -
Vifa5g03203 460 Coils Coil 101 121 - -
Vifa5g03203 460 Coils Coil 139 180 - -
Vifa5g03203 460 MobiDBLite consensus disorder prediction 51 81 - -
Vifa5g03203 460 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 114 177 IPR004827 GO:0003700|GO:0006355
Vifa5g03203 460 PANTHER G-BOX-BINDING FACTOR 3-RELATED 42 245 IPR044827 GO:0003700|GO:0006355|GO:0043565
Vifa5g03203 460 SMART brlzneu 112 176 IPR004827 GO:0003700|GO:0006355
Vifa5g03203 460 Coils Coil 437 457 - -
Vifa5g03203 460 MobiDBLite consensus disorder prediction 317 358 - -
Vifa5g03203 460 MobiDBLite consensus disorder prediction 1 31 - -
Vifa5g03203 460 CDD bZIP_plant_GBF1 117 168 IPR045314 GO:0003700|GO:0006355
Vifa5g03203 460 MobiDBLite consensus disorder prediction 317 333 - -
Vifa5g03203 460 MobiDBLite consensus disorder prediction 52 68 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03203 96 460 bZIP Transcription Factor Family AT1G19490 35.325 2.30e-46 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03203 - - gmx:100788624 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03203 5 1060762155 1060765183 Vifa5g03203 5 1060762155 1060765183 ECH