Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03062 ATGGCTCGTAGTATCTCCTACGTCACTGGCTCGCAGCTTGTCTCTCTCAAACGACTTCCGACCATCGCCGTCGTCGATGTCAGAGACGACGAGAGGACTCACGACGGTCACATATCCGGTTCTCTTCATTACGCTAGCGACGGTTTCGACCAAAACATCTCCAAGCTTCTTCATGATGTTAAGGGAAAAGATACCCTCGTCTTTCACTGCGCTCTAAGTCAGGTTCGAGGCCCAACATGTGCAAGGAAGCTTGTCAATTATCTTGAAGAGAACAAGGAAGATGTTGGTATAAAGAACATTATGGTCTTGGAACGTGGCTTCAACGGGTGGGAGGCATCTGGTAGACCTGTTTGCCGCTGCAACAATGTTCCTTGCAAGGAGCATGAAAATGCTTAA 396 0.4848 MARSISYVTGSQLVSLKRLPTIAVVDVRDDERTHDGHISGSLHYASDGFDQNISKLLHDVKGKDTLVFHCALSQVRGPTCARKLVNYLEENKEDVGIKNIMVLERGFNGWEASGRPVCRCNNVPCKEHENA 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03062 131 SMART rhod_4 8 116 IPR001763 -
Vifa5g03062 131 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 3 127 IPR036873 -
Vifa5g03062 131 FunFam Dual-specificity phosphatase CDC25 1 130 - -
Vifa5g03062 131 Gene3D - 1 130 IPR036873 -
Vifa5g03062 131 ProSiteProfiles Rhodanese domain profile. 18 119 IPR001763 -
Vifa5g03062 131 Pfam Rhodanese-like domain 17 112 IPR001763 -
Vifa5g03062 131 PANTHER M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25 5 125 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03062 1 75 Sulfurtransferasese or Rhodanese AT5G03455 69.333 1.15e-33 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03062 K18065 - gmx:100305790 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03062 5 1012908084 1012909115 Vifa5g03062 5 1012908084 1012909115 ECH