Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03044 ATGTCAGCATACCGATGGAAAACCTTCGACGAGAACGAGGATCATCCCTCCAAACCTCGTCGCTACGGCGTCACCGAGATGCGAAGTCCCCATTACACTCTCTTCAACCACAATGTTCTTCAGGATATTTTTGAATCTATGGGAGACTATGTTGACGGTTTAAAAATCTATGGAGGCTCTGATAGCTTGATGCCAAAAGCTTTTATCAAGCAAGTCATTGATACGGCTCATCAGCATGATGTGTATGTTAGCACGGGAGATTGGGCTGAACATATCATTCACAAAGCTCCATCAGGCTTCAAACACTATCTACAGGTCTGCACTGTCGTTTTGTTGTATTGA 342 0.4415 MSAYRWKTFDENEDHPSKPRRYGVTEMRSPHYTLFNHNVLQDIFESMGDYVDGLKIYGGSDSLMPKAFIKQVIDTAHQHDVYVSTGDWAEHIIHKAPSGFKHYLQVCTVVLLY 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03044 113 Pfam (2R)-phospho-3-sulfolactate synthase (ComA) 14 108 IPR003830 -
Vifa5g03044 113 MobiDBLite consensus disorder prediction 1 23 - -
Vifa5g03044 113 SUPERFAMILY (2r)-phospho-3-sulfolactate synthase ComA 13 108 IPR036112 -
Vifa5g03044 113 Gene3D Aldolase class I 11 110 IPR013785 -
Vifa5g03044 113 MobiDBLite consensus disorder prediction 7 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03044 Vifa-Chr5 1006970524 1006970937 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03044 4 107 Subtilisin-like Serine Gene Family AT4G21320 67.308 1.11e-53 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03044 - - gmx:100805668 181.8