Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03025 ATGGGAAAATCAAGTACTAGTTTTTCTAAGGGATTTTGGAAAGATAGGTTTGGAGTATTAATGAAGAAGCTTCAAAAAAGAATAATGATGAAGCAAGGTCATTTTGTGGTGATTGCAACTCAAGGGTGGAAGCCAGAAAGATTCTGTGTTGAATTGGAATATTTAGACCATCCTGACTTTGTGAAACTGTTGAAACAAGCTGAAGAAGAGTTTGGATTCTCTCAAGATGGAGCAATTGCAATACCTTGTGAGCCTGATGAGTTGAAGAGAATCATTGGAAGGAAAAAACATCACATAAACATCAAGGGTATTGATATTACTTGTTAG 327 0.3578 MGKSSTSFSKGFWKDRFGVLMKKLQKRIMMKQGHFVVIATQGWKPERFCVELEYLDHPDFVKLLKQAEEEFGFSQDGAIAIPCEPDELKRIIGRKKHHINIKGIDITC 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03025 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 24 91 IPR003676 GO:0009733
Vifa5g03025 108 Pfam Auxin responsive protein 29 92 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03025 Vifa-Chr5 997768419 997768745 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03025 33 93 Calmodulin-binding Proteins AT4G34750 40.984 2.83e-10 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03025 - K14488 gmx:100816753 142.895