Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03012 ATGAAGTGCAAGTTTCTAAGAGGATGTGTAAACAAGTGGAAGAAAATGAGGAATGAATTATTGACAACACCTTGTAACTATTGGTTTAGATTATCCTCTTCTATTCCAAAGGATGTTCCAAAGGGTCACTTGGTTGTTTATGTAGGAGAGAATTATAAGAGATTTGTCATCAAGGTTGTATTGCTTAATCATCCACTTTTTAAAGCTTTGTTGGATCAAGCTCGAGAAGAATATGATTTCATTGCTGATTCTAAACTTTGTATTCCTTGTAATGAACATTTTTTCCTTAGTATTCTTAGTTTTGTTAATTCTCCACATCATGAAAGGGTGTTTGTTTGTGTTTTACATGAGAAATCAATTAGCATTTGA 369 0.3225 MKCKFLRGCVNKWKKMRNELLTTPCNYWFRLSSSIPKDVPKGHLVVYVGENYKRFVIKVVLLNHPLFKALLDQAREEYDFIADSKLCIPCNEHFFLSILSFVNSPHHERVFVCVLHEKSISI 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03012 122 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 22 97 IPR003676 GO:0009733
Vifa5g03012 122 Pfam Auxin responsive protein 12 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03012 Vifa-Chr5 991275863 991276231 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03012 38 102 Calmodulin-binding Proteins AT4G34750 49.231 1.17e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03012 K14488 - gmx:100793017 152.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03012 5 991275863 991276231 Vifa5g03012 5 991275863 991276231 ECH