Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02993 ATGGTGAAGCTTTTCTGGGTTAGCATTGTAATAGCACTTGTTTTCATCAAATTGGTTGATGCATATCACATCAATGAAACTGAACTCTCTATCTTAGAAGCTCATGAAGGTTATTCTTTTTCTTCCAACCTTGTGAATCAGCCTCGCATGGTGGGAATCACCTTTATTCAATCTGCTGCTGCTAAAGGAGCTGTCTACTTGGATGGAACATTGCCTGCTTATCATTTCGACCGCGGATACGGATCGGGAGCAAACAGCTGGATTGTTAACTTAGAGGGAGGTGCGTGGTGTAATAACGTTAGAACATGCGTTTATCGCAAGACTACACGGCGTGGATCATCAAATTTCATGGAGAAGGCGATACCTTTTACGGGAATAATGAGCAATAATCCTCGAGAGAATCCAGATTTCTTTAACTGGAATAGAGTGAAAATTCGTTACTGTGATGGTGCTTCTTTTACCGGTGATAGTGAAAATAGGGTAATTCCTGGCAATCTGATACTCAACATGCTTCTCCATCACCTCTCACCTAATAGTTTTCACATGGGAAGAACTCTCTTGCACCACACCATCATTTGCAACAATGAAAGAGCATTGAATGTTGAATGTACTTCTGAATAA 621 0.409 MVKLFWVSIVIALVFIKLVDAYHINETELSILEAHEGYSFSSNLVNQPRMVGITFIQSAAAKGAVYLDGTLPAYHFDRGYGSGANSWIVNLEGGAWCNNVRTCVYRKTTRRGSSNFMEKAIPFTGIMSNNPRENPDFFNWNRVKIRYCDGASFTGDSENRVIPGNLILNMLLHHLSPNSFHMGRTLLHHTIICNNERALNVECTSE 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02993 206 PANTHER NOTUM-RELATED 32 180 IPR004963 GO:0016787
Vifa5g02993 206 Pfam Pectinacetylesterase 46 159 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02993 Vifa-Chr5 988035272 988036371 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02993 1 161 Carbohydrate Esterase AT3G05910 60.000 6.01e-64 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02993 K19882 - gmx:100788448 237.269